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Table 4 IQ-tree BIC best-fit model results for all dataset

From: Phylotranscriptomics suggests the jawed vertebrate ancestor could generate diverse helper and regulatory T cell subsets

Dataset

Best overall

Best standard

IL-2 superfamily

JTT + F + G

JTT + F + G

IL-7/9 family no outgroup

JTT + G

JTT + G

IL-7/9 family outgroup

JTT + G

JTT + G

IL-4/13 family no outgroup

WAG+G

WAG+G

IL-4/13 family outgroup

WAG+G

WAG+G

IL-6 superfamily

JTT + C10 + F

LG + F + G

IL-6Rα family

JTT + I + G

JTT + I + G

IL-2Rα/IL-15Rα

WAG+I + G

WAG+I + G

Class-1 Group-2 cytokine receptors

JTT + C30 + F

WAG+F + I + G

ROR no outgroup

JTT + I + G

JTT + I + G

ROR HR3 outgroup

JTT + I + G

JTT + I + G

ROR RAR outgroup

JTT + G

JTT + G

FOXP no outgroup

JTT + C20 + F

JTT + I + G

FOXP invertebrate outgroup

JTT + C10 + F

JTT + F + I + G