Primer | Direction | Sequence5’-3’ | PCR condition | Reference |
---|---|---|---|---|
CO1 | ||||
LCO1490 | Forward | GGTCAACAATCATAAAGATATTGG | 94 °C 4 min, (94 °C 30 s, 48 °C 30 s, 72 °C 90 s) × 34, 72 °C 2 min | Folmer et al. [110], PCR condition was slightly modified. |
HCO2198 | Reverse | TAAACTTCAGGGTGACCAAAAAATCA | Â | Â |
16S | ||||
16Sar-L | Forward | CGCCTGTTTATCAAAAACAT | 94 °C 4 min, (94 °C 30 s, 40 °C 30 s, 72 °C 60 s) × 34, 72 °C 5 min | Palmubi et al. [111], PCR condition was slightly modified. |
16Sbr-H | Reverse | CCGGTCTGAACTCAGATCACGT | Â | Â |
H3 | ||||
H3PulF | Forward | GGAGGCAAGGCCCCACGTAARCA | 94 °C 3 min, (94 °C 15 s, 57 °C 30 s, 72 °C 40 s) × 40, 72 °C 1 min | Uit de Weerd and Gittenberger [112]. |
H3PulR | Reverse | TTGGCGTGGATGGCGCACARG | Â | Â |