TY - BOOK AU - Darwin, C. PY - 1871 DA - 1871// TI - Sexual selection and the descent of man PB - Murray CY - London ID - Darwin1871 ER - TY - STD TI - Greenfield MD. Signalers and receivers: mechanisms and evolution of arthropod communication. Oxford: Oxford University Press; 2002. ID - ref2 ER - TY - JOUR AU - Endler, J. A. PY - 1992 DA - 1992// TI - Signals, signal conditions, and the direction of evolution JO - Am Nat VL - 139 UR - https://doi.org/10.1086/285308 DO - 10.1086/285308 ID - Endler1992 ER - TY - JOUR AU - Lall, A. B. AU - Seliger, H. H. AU - Biggley, W. H. AU - Lloyd, J. E. PY - 1980 DA - 1980// TI - Ecology of colors of firefly bioluminescence JO - Sci VL - 210 UR - https://doi.org/10.1126/science.210.4469.560 DO - 10.1126/science.210.4469.560 ID - Lall1980 ER - TY - JOUR AU - Lall, A. B. AU - Lord, E. T. AU - Ovid Trouth, C. PY - 1982 DA - 1982// TI - Vision in the firefly Photuris lucicrescens (Coleoptera: Lampyridae): spectral sensitivity and selective adaptation in the compound eye JO - J Comp Physiol VL - 147 UR - https://doi.org/10.1007/BF00609844 DO - 10.1007/BF00609844 ID - Lall1982 ER - TY - JOUR AU - Seliger, H. H. AU - Lloyd, J. E. AU - Biggley, W. H. PY - 1982 DA - 1982// TI - The colors of firefly bioluminescence—I. Optimization model JO - Photochem Photobiol VL - 36 UR - https://doi.org/10.1111/j.1751-1097.1982.tb09488.x DO - 10.1111/j.1751-1097.1982.tb09488.x ID - Seliger1982 ER - TY - JOUR AU - Seliger, H. H. AU - Lall, A. B. AU - Lloyd, J. E. AU - Biggley, W. H. PY - 1982 DA - 1982// TI - The colors of firefly bioluminescence—II Experimental evidence for the optimization model JO - Photochem Photobiol VL - 36 UR - https://doi.org/10.1111/j.1751-1097.1982.tb09489.x DO - 10.1111/j.1751-1097.1982.tb09489.x ID - Seliger1982 ER - TY - JOUR AU - Lall, A. B. PY - 1993 DA - 1993// TI - Action spectra for the initiation of bioluminescent flashing activity in males of twilight-active firefly Photinus scintillans (Coleoptera: Lampyridae) JO - J Insect Physiol VL - 39 UR - https://doi.org/10.1016/0022-1910(93)90103-X DO - 10.1016/0022-1910(93)90103-X ID - Lall1993 ER - TY - JOUR AU - Lall, A. B. PY - 1994 DA - 1994// TI - Spectral cues for the regulation of bioluminescent flashing activity in the males of twilight-active firefly Photinus scintillans (Coleoptera: Lampyridae) in nature JO - J Insect Physiol VL - 40 UR - https://doi.org/10.1016/0022-1910(94)90077-9 DO - 10.1016/0022-1910(94)90077-9 ID - Lall1994 ER - TY - JOUR AU - Lall, A. B. AU - Worthy, K. M. PY - 2000 DA - 2000// TI - Action spectra of the female’s response in the firefly Photinus pyralis (Coleoptera: Lampyridae): evidence for an achromatic detection of the bioluminescent optical signal JO - J Insect Physiol VL - 46 UR - https://doi.org/10.1016/S0022-1910(99)00206-1 DO - 10.1016/S0022-1910(99)00206-1 ID - Lall2000 ER - TY - JOUR AU - Cronin, T. W. AU - Järvilehto, M. AU - Weckström, M. AU - Lall, A. B. PY - 2000 DA - 2000// TI - Tuning of photoreceptor spectral sensitivity in fireflies (Coleoptera: Lampyridae) JO - J Comp Physiol A VL - 186 UR - https://doi.org/10.1007/s003590050001 DO - 10.1007/s003590050001 ID - Cronin2000 ER - TY - JOUR AU - Ohba, N. PY - 2004 DA - 2004// TI - Flash communication systems of Japanese fireflies JO - Integr Comp Biol VL - 44 UR - https://doi.org/10.1093/icb/44.3.225 DO - 10.1093/icb/44.3.225 ID - Ohba2004 ER - TY - JOUR AU - Stanger-Hall, K. F. AU - Lloyd, J. E. AU - Hillis, D. M. PY - 2007 DA - 2007// TI - Phylogeny of North American fireflies (Coleoptera: Lampyridae): implications for the evolution of light signals JO - Mol Phylogenet Evol VL - 45 UR - https://doi.org/10.1016/j.ympev.2007.05.013 DO - 10.1016/j.ympev.2007.05.013 ID - Stanger-Hall2007 ER - TY - JOUR AU - Stanger-Hall, K. F. AU - Lloyd, J. E. PY - 2015 DA - 2015// TI - Flash signal evolution in Photinus fireflies: character displacement and signal exploitation in a visual communication system JO - Evolution. VL - 69 UR - https://doi.org/10.1111/evo.12606 DO - 10.1111/evo.12606 ID - Stanger-Hall2015 ER - TY - JOUR AU - Sander, S. E. AU - Hall, D. W. PY - 2015 DA - 2015// TI - Variation in opsin genes correlates with signalling ecology in North American fireflies JO - Mol Ecol VL - 24 UR - https://doi.org/10.1111/mec.13346 DO - 10.1111/mec.13346 ID - Sander2015 ER - TY - JOUR AU - Hall, D. W. AU - Sander, S. E. AU - Pallansch, J. C. AU - Stanger-Hall, K. F. PY - 2016 DA - 2016// TI - The evolution of adult light emission color in North American fireflies JO - Evolution VL - 70 UR - https://doi.org/10.1111/evo.13002 DO - 10.1111/evo.13002 ID - Hall2016 ER - TY - JOUR AU - Buck, J. B. PY - 1937 DA - 1937// TI - Studies on the firefly. II. The signal system and color vision in Photinus pyralis JO - Physiol Zool VL - 10 UR - https://doi.org/10.1086/physzool.10.4.30151427 DO - 10.1086/physzool.10.4.30151427 ID - Buck1937 ER - TY - BOOK AU - Lloyd, J. E. PY - 1966 DA - 1966// TI - Studies on the flash communication system in Photinus fireflies PB - Museum of Zoology, University of Michigan CY - Ann Arbor, Michigan ID - Lloyd1966 ER - TY - CHAP AU - Lloyd, J. E. ED - Blum, M. S. ED - Blum, N. A. PY - 1979 DA - 1979// TI - Sexual selection in luminescent beetles BT - Sexual selection and reproductive competition in insects PB - Academic Press CY - New York ID - Lloyd1979 ER - TY - JOUR AU - Cratsley, C. K. AU - Lewis, S. M. PY - 2003 DA - 2003// TI - Female preference for male courtship flashes in Photinus ignitus fireflies JO - Behav Ecol VL - 14 UR - https://doi.org/10.1093/beheco/14.1.135 DO - 10.1093/beheco/14.1.135 ID - Cratsley2003 ER - TY - JOUR AU - Lewis, S. M. AU - Cratsley, C. K. PY - 2008 DA - 2008// TI - Flash signal evolution, mate choice, and predation in fireflies JO - Annu Rev Entomol VL - 53 UR - https://doi.org/10.1146/annurev.ento.53.103106.093346 DO - 10.1146/annurev.ento.53.103106.093346 ID - Lewis2008 ER - TY - JOUR AU - Lewis, S. M. AU - Cratsley, C. K. AU - Demary, K. PY - 2004 DA - 2004// TI - Mate recognition and choice in Photinus fireflies JO - Ann Zool Fennici VL - 41 ID - Lewis2004 ER - TY - JOUR AU - Demary, K. C. AU - Lewis, S. M. PY - 2007 DA - 2007// TI - Male courtship attractiveness and paternity success in Photinus greeni fireflies JO - Evolution VL - 61 UR - https://doi.org/10.1111/j.1558-5646.2007.00033.x DO - 10.1111/j.1558-5646.2007.00033.x ID - Demary2007 ER - TY - JOUR AU - Biggley, W. H. AU - Lloyd, J. E. AU - Seliger, H. H. PY - 1967 DA - 1967// TI - The spectral distribution of firefly light JO - II J Gen Physiol VL - 50 UR - https://doi.org/10.1085/jgp.50.6.1681 DO - 10.1085/jgp.50.6.1681 ID - Biggley1967 ER - TY - JOUR AU - Eguchi, E. AU - Nemoto, A. AU - Meyer-Rochow, V. B. AU - Ohba, N. PY - 1984 DA - 1984// TI - A comparative study of spectral sensitivity curves in three diurnal and eight nocturnal species of Japanese fireflies JO - J Insect Physiol VL - 30 UR - https://doi.org/10.1016/0022-1910(84)90044-1 DO - 10.1016/0022-1910(84)90044-1 ID - Eguchi1984 ER - TY - JOUR AU - Seliger, H. H. AU - McElroy, W. D. PY - 1960 DA - 1960// TI - Spectral emission and quantum yield of firefly bioluminescence JO - Archives Biochemistry Biophysics VL - 88 UR - https://doi.org/10.1016/0003-9861(60)90208-3 DO - 10.1016/0003-9861(60)90208-3 ID - Seliger1960 ER - TY - JOUR AU - Fraga, H. PY - 2008 DA - 2008// TI - Firefly luminescence: a historical perspective and recent developments JO - Photochem Photobiol Sci VL - 7 UR - https://doi.org/10.1039/b719181b DO - 10.1039/b719181b ID - Fraga2008 ER - TY - JOUR AU - Kajiyama, N. AU - Nakano, E. PY - 1991 DA - 1991// TI - Isolation and characterization of mutants of firefly luciferase which produce different colors of light JO - Protein Eng VL - 4 UR - https://doi.org/10.1093/protein/4.6.691 DO - 10.1093/protein/4.6.691 ID - Kajiyama1991 ER - TY - JOUR AU - Conti, E. AU - Franks, N. P. AU - Brick, P. PY - 1996 DA - 1996// TI - Crystal structure of firefly luciferase throws light on a superfamily of adenylate-forming enzymes JO - Structure VL - 4 UR - https://doi.org/10.1016/S0969-2126(96)00033-0 DO - 10.1016/S0969-2126(96)00033-0 ID - Conti1996 ER - TY - JOUR AU - Branchini, B. R. AU - Southworth, T. L. AU - Fontaine, D. M. AU - Murtiashaw, M. H. AU - McGurk, A. AU - Talukder, M. H. PY - 2017 DA - 2017// TI - Cloning of the orange light-producing luciferase from Photinus scintillans-a new proposal on how bioluminescence color is determined JO - Photochem Photobiol VL - 93 UR - https://doi.org/10.1111/php.12671 DO - 10.1111/php.12671 ID - Branchini2017 ER - TY - JOUR AU - Branchini, B. R. AU - Ablamsky, D. M. AU - Murtiashaw, M. H. AU - Uzasci, L. AU - Fraga, H. AU - Southworth, T. L. PY - 2007 DA - 2007// TI - Thermostable red and green light-producing firefly luciferase mutants for bioluminescent reporter applications JO - Anal Biochem VL - 361 UR - https://doi.org/10.1016/j.ab.2006.10.043 DO - 10.1016/j.ab.2006.10.043 ID - Branchini2007 ER - TY - JOUR AU - Branchini, B. R. AU - Magyar, R. A. AU - Murtiashaw, M. H. AU - Anderson, S. M. AU - Zimmer, M. PY - 1998 DA - 1998// TI - Site-directed mutagenesis of histidine 245 in firefly luciferase: a proposed model of the active site JO - Biochemistry VL - 37 UR - https://doi.org/10.1021/bi981150d DO - 10.1021/bi981150d ID - Branchini1998 ER - TY - JOUR AU - Branchini, B. R. AU - Southworth, T. L. AU - Khattak, N. F. AU - Michelini, E. AU - Roda, A. PY - 2005 DA - 2005// TI - Red- and green-emitting firefly luciferase mutants for bioluminescent reporter applications JO - Anal Biochem VL - 345 UR - https://doi.org/10.1016/j.ab.2005.07.015 DO - 10.1016/j.ab.2005.07.015 ID - Branchini2005 ER - TY - JOUR AU - Branchini, B. R. AU - Magyar, R. A. AU - Murtiashaw, M. H. AU - Portier, N. C. PY - 2001 DA - 2001// TI - The role of active site residue arginine 218 in firefly luciferase bioluminescence JO - Biochemistry. VL - 40 UR - https://doi.org/10.1021/bi002246m DO - 10.1021/bi002246m ID - Branchini2001 ER - TY - JOUR AU - Branchini, B. R. AU - Southworth, T. L. AU - Murtiashaw, M. H. AU - Boije, H. AU - Fleet, S. E. PY - 2003 DA - 2003// TI - A mutagenesis study of the putative luciferin binding site residues of firefly luciferase JO - Biochemistry VL - 42 UR - https://doi.org/10.1021/bi030099x DO - 10.1021/bi030099x ID - Branchini2003 ER - TY - JOUR AU - Shapiro, E. AU - Lu, C. AU - Baneyx, F. PY - 2005 DA - 2005// TI - A set of multicolored Photinus pyralis luciferase mutants for in vivo bioluminescence applications JO - Protein Eng Des Sel VL - 18 UR - https://doi.org/10.1093/protein/gzi066 DO - 10.1093/protein/gzi066 ID - Shapiro2005 ER - TY - JOUR AU - Nakatsu, T. AU - Ichiyama, S. AU - Hiratake, J. AU - Saldanha, A. AU - Kobashi, N. AU - Sakata, K. PY - 2006 DA - 2006// TI - Structural basis for the spectral difference in luciferase bioluminescence JO - Nature VL - 440 UR - https://doi.org/10.1038/nature04542 DO - 10.1038/nature04542 ID - Nakatsu2006 ER - TY - JOUR AU - Day, J. C. AU - Goodall, T. I. AU - Bailey, M. J. PY - 2009 DA - 2009// TI - The evolution of the adenylate-forming protein family in beetles: multiple luciferase gene paralogues in fireflies and glow-worms JO - Mol Phylogenet Evol VL - 50 UR - https://doi.org/10.1016/j.ympev.2008.09.026 DO - 10.1016/j.ympev.2008.09.026 ID - Day2009 ER - TY - JOUR AU - Oba, Y. AU - Mori, N. AU - Yoshida, M. AU - Inouye, S. PY - 2010 DA - 2010// TI - Identification and characterization of a luciferase isotype in the Japanese firefly, Luciola cruciata, involving in the dim glow of firefly eggs JO - Biochemistry VL - 49 UR - https://doi.org/10.1021/bi1016342 DO - 10.1021/bi1016342 ID - Oba2010 ER - TY - JOUR AU - Oba, Y. AU - Furuhashi, M. AU - Bessho, M. AU - Sagawa, S. AU - Ikeya, H. AU - Inouye, S. PY - 2013 DA - 2013// TI - Bioluminescence of a firefly pupa: involvement of a luciferase isotype in the dim glow of pupae and eggs in the Japanese firefly,Luciola lateralis JO - Photochem Photobiol Sci VL - 12 UR - https://doi.org/10.1039/c3pp25363e DO - 10.1039/c3pp25363e ID - Oba2013 ER - TY - JOUR AU - Palczewski, K. AU - Kumasaka, T. AU - Hori, T. AU - Behnke, C. A. AU - Motoshima, H. AU - Fox, B. A. PY - 2000 DA - 2000// TI - Crystal structure of rhodopsin: a G protein-coupled receptor JO - Sci VL - 289 UR - https://doi.org/10.1126/science.289.5480.739 DO - 10.1126/science.289.5480.739 ID - Palczewski2000 ER - TY - STD TI - Yokoyama S, Yokoyama R. Chapter 6 Comparative molecular biology of visual pigments. In: Stavenga DG, DeGrip WJ, Pugh EN, editors. Handbook of biological physics: North-Holland; 2000;3:257–96. http://www.sciencedirect.com/science/article/pii/S1383812100800093. UR - http://www.sciencedirect.com/science/article/pii/S1383812100800093 ID - ref42 ER - TY - JOUR AU - Yokoyama, S. PY - 2008 DA - 2008// TI - Evolution of dim-light and color vision pigments JO - Annu Rev Genomics Hum Genet VL - 9 UR - https://doi.org/10.1146/annurev.genom.9.081307.164228 DO - 10.1146/annurev.genom.9.081307.164228 ID - Yokoyama2008 ER - TY - JOUR AU - Yokoyama, S. AU - Yang, H. AU - Starmer, W. T. PY - 2008 DA - 2008// TI - Molecular basis of spectral tuning in the red- and green-sensitive (M/LWS) pigments in vertebrates JO - Genetics VL - 179 UR - https://doi.org/10.1534/genetics.108.090449 DO - 10.1534/genetics.108.090449 ID - Yokoyama2008 ER - TY - JOUR AU - Oba, Y. AU - Kainuma, T. PY - 2009 DA - 2009// TI - Diel changes in the expression of long wavelength-sensitive and ultraviolet-sensitive opsin genes in the Japanese firefly, Luciola cruciata JO - Gene VL - 436 UR - https://doi.org/10.1016/j.gene.2009.02.001 DO - 10.1016/j.gene.2009.02.001 ID - Oba2009 ER - TY - JOUR AU - Martin, G. J. AU - Lord, N. P. AU - Branham, M. A. AU - Bybee, S. M. PY - 2015 DA - 2015// TI - Review of the firefly visual system (Coleoptera: Lampyridae) and evolution of the opsin genes underlying color vision JO - Org Divers Evol VL - 15 UR - https://doi.org/10.1007/s13127-015-0212-z DO - 10.1007/s13127-015-0212-z ID - Martin2015 ER - TY - JOUR AU - Dacke, M. AU - Byrne, M. J. AU - Scholtz, C. H. AU - Warrant, E. J. PY - 2004 DA - 2004// TI - Lunar orientation in a beetle JO - Proc Biol Sci VL - 271 UR - https://doi.org/10.1098/rspb.2003.2594 DO - 10.1098/rspb.2003.2594 ID - Dacke2004 ER - TY - JOUR AU - Peterson, B. K. AU - Weber, J. N. AU - Kay, E. H. AU - Fisher, H. S. AU - Hoekstra, H. E. PY - 2012 DA - 2012// TI - Double digest RADseq: an inexpensive method for de novo SNP discovery and genotyping in model and non-model species JO - PLoS One VL - 7 UR - https://doi.org/10.1371/journal.pone.0037135 DO - 10.1371/journal.pone.0037135 ID - Peterson2012 ER - TY - JOUR AU - Antao, T. AU - Lopes, A. AU - Lopes, R. J. AU - Beja-Pereira, A. AU - Luikart, G. PY - 2008 DA - 2008// TI - A workbench to detect molecular adaptation based on a Fst-outlier method JO - BMC Bioinformatics VL - 9 UR - https://doi.org/10.1186/1471-2105-9-323 DO - 10.1186/1471-2105-9-323 ID - Antao2008 ER - TY - JOUR AU - Foll, M. AU - Gaggiotti, O. PY - 2008 DA - 2008// TI - A genome-scan method to identify selected loci appropriate for both dominant and codominant markers: a Bayesian perspective JO - Genetics VL - 180 UR - https://doi.org/10.1534/genetics.108.092221 DO - 10.1534/genetics.108.092221 ID - Foll2008 ER - TY - JOUR AU - Villemereuil, P. AU - Gaggiotti, O. E. PY - 2015 DA - 2015// TI - A new FST-based method to uncover local adaptation using environmental variables JO - Methods Ecol Evol VL - 6 UR - https://doi.org/10.1111/2041-210X.12418 DO - 10.1111/2041-210X.12418 ID - Villemereuil2015 ER - TY - JOUR AU - Sethuraman, A. AU - Janzen, F. J. AU - Obrycki, J. PY - 2015 DA - 2015// TI - Population genetics of the predatory lady beetle Hippodamia convergens JO - Biol Control VL - 84 UR - https://doi.org/10.1016/j.biocontrol.2015.01.002 DO - 10.1016/j.biocontrol.2015.01.002 ID - Sethuraman2015 ER - TY - JOUR AU - Batista, P. D. AU - Janes, J. K. AU - Boone, C. K. AU - Murray, B. W. AU - Sperling, F. A. H. PY - 2016 DA - 2016// TI - Adaptive and neutral markers both show continent-wide population structure of mountain pine beetle (Dendroctonus ponderosae) JO - Ecol Evol VL - 6 UR - https://doi.org/10.1002/ece3.2367 DO - 10.1002/ece3.2367 ID - Batista2016 ER - TY - JOUR AU - Faust, L. AU - Faust, H. PY - 2014 DA - 2014// TI - The occurrence and behaviors of North American fireflies (Coleoptera: Lampyridae) on milkweed, Asclepias syriaca L JO - Coleopt Bull The Coleopterists Society VL - 68 ID - Faust2014 ER - TY - JOUR AU - McLean, M. AU - Buck, J. AU - Hanson, F. E. PY - 1972 DA - 1972// TI - Culture and larval behavior of Photurid fireflies JO - Am Midl Nat VL - 87 UR - https://doi.org/10.2307/2423887 DO - 10.2307/2423887 ID - McLean1972 ER - TY - JOUR AU - Zamudio, K. R. AU - Savage, W. K. PY - 2003 DA - 2003// TI - Historical isolation, range expansion, and secondary contact of two highly divergent mitochondrial lineages in spotted salamanders (Ambystoma maculatum) JO - Evolution VL - 57 UR - https://doi.org/10.1111/j.0014-3820.2003.tb00370.x DO - 10.1111/j.0014-3820.2003.tb00370.x ID - Zamudio2003 ER - TY - JOUR AU - Soltis, D. E. AU - Morris, A. B. AU - McLachlan, J. S. AU - Manos, P. S. AU - Soltis, P. S. PY - 2006 DA - 2006// TI - Comparative phylogeography of unglaciated eastern North America JO - Mol Ecol VL - 15 UR - https://doi.org/10.1111/j.1365-294X.2006.03061.x DO - 10.1111/j.1365-294X.2006.03061.x ID - Soltis2006 ER - TY - JOUR AU - Walker, M. J. AU - Stockman, A. K. AU - Marek, P. E. AU - Bond, J. E. PY - 2009 DA - 2009// TI - Pleistocene glacial refugia across the Appalachian Mountains and coastal plain in the millipede genus Narceus: evidence from population genetic, phylogeographic,and paleoclimatic data JO - BMC Evol Biol VL - 9 UR - https://doi.org/10.1186/1471-2148-9-25 DO - 10.1186/1471-2148-9-25 ID - Walker2009 ER - TY - BOOK AU - Howes, N. PY - 1993 DA - 1993// TI - Catching fireflies for fun and profit ID - Howes1993 ER - TY - JOUR AU - de Wet, J. R. AU - Wood, K. V. AU - Helinski, D. R. AU - DeLuca, M. PY - 1985 DA - 1985// TI - Cloning of firefly luciferase cDNA and the expression of active luciferase in Escherichia coli JO - Proc Natl Acad Sci USA VL - 82 UR - https://doi.org/10.1073/pnas.82.23.7870 DO - 10.1073/pnas.82.23.7870 ID - de Wet1985 ER - TY - JOUR AU - Bauer, C. M. AU - Nachman, G. AU - Lewis, S. M. AU - Faust, L. F. AU - Reed, J. M. PY - 2013 DA - 2013// TI - Modeling effects of harvest on firefly population persistence JO - Ecol Modell VL - 256 UR - https://doi.org/10.1016/j.ecolmodel.2013.02.018 DO - 10.1016/j.ecolmodel.2013.02.018 ID - Bauer2013 ER - TY - JOUR AU - Law, G. H. E. AU - Gandelman, O. A. AU - Tisi, L. C. AU - Lowe, C. R. AU - Murray, J. A. H. PY - 2006 DA - 2006// TI - Mutagenesis of solvent-exposed amino acids in Photinus pyralis luciferase improves thermostability and pH-tolerance JO - Biochem J VL - 397 UR - https://doi.org/10.1042/BJ20051847 DO - 10.1042/BJ20051847 ID - Law2006 ER - TY - JOUR AU - de Wet, J. R. AU - Wood, K. V. AU - DeLuca, M. AU - Helinski, D. R. AU - Subramani, S. PY - 1987 DA - 1987// TI - Firefly luciferase gene: structure and expression in mammalian cells JO - Mol Cell Biol VL - 7 UR - https://doi.org/10.1128/MCB.7.2.725 DO - 10.1128/MCB.7.2.725 ID - de Wet1987 ER - TY - JOUR AU - Day, J. C. PY - 2005 DA - 2005// TI - Characterisation of the luciferase gene and the 5’ upstream region in the European glow-worm Lampyris noctiluca (Coleoptera: Lampyridae) JO - Eur J Entomol VL - 102 UR - https://doi.org/10.14411/eje.2005.107 DO - 10.14411/eje.2005.107 ID - Day2005 ER - TY - JOUR AU - Cho, K. H. AU - Lee, J. S. AU - Choi, Y. D. AU - Boo, K. S. PY - 1999 DA - 1999// TI - Structural polymorphism of the luciferase gene in the firefly, Luciola lateralis JO - Insect Mol Biol Blackwell Science Ltd VL - 8 UR - https://doi.org/10.1046/j.1365-2583.1999.820193.x DO - 10.1046/j.1365-2583.1999.820193.x ID - Cho1999 ER - TY - JOUR AU - Feschotte, C. PY - 2008 DA - 2008// TI - Transposable elements and the evolution of regulatory networks JO - Nat Rev Genet VL - 9 UR - https://doi.org/10.1038/nrg2337 DO - 10.1038/nrg2337 ID - Feschotte2008 ER - TY - JOUR AU - Vencl, F. V. AU - Carlson, A. D. PY - 1998 DA - 1998// TI - Proximate mechanisms of sexual selection in the firefly Photinus pyralis (Coleoptera: Lampyridae) JO - J Insect Behav VL - 11 UR - https://doi.org/10.1023/A:1021091806472 DO - 10.1023/A:1021091806472 ID - Vencl1998 ER - TY - JOUR AU - Lloyd, J. E. PY - 1965 DA - 1965// TI - Aggressive mimicry in Photuris: firefly femmes fatales JO - Sci VL - 149 UR - https://doi.org/10.1126/science.149.3684.653 DO - 10.1126/science.149.3684.653 ID - Lloyd1965 ER - TY - JOUR AU - Buck, J. B. PY - 1948 DA - 1948// TI - The anatomy and physiology of the light organ in fireflies JO - Ann N Y Acad Sci VL - 49 UR - https://doi.org/10.1111/j.1749-6632.1948.tb30944.x DO - 10.1111/j.1749-6632.1948.tb30944.x ID - Buck1948 ER - TY - JOUR AU - Viviani, V. R. AU - Oehlmeyer, T. L. AU - Arnoldi, F. PY - 2005 DA - 2005// TI - A new firefly luciferase with bimodal spectrum: identification of structural determinants of spectral pH-sensitivity in firefly luciferases JO - Photochem Photobiol VL - 81 UR - https://doi.org/10.1562/2004-12-09-RA-398R.1 DO - 10.1562/2004-12-09-RA-398R.1 ID - Viviani2005 ER - TY - JOUR AU - Viviani, V. R. PY - 2002 DA - 2002// TI - The origin, diversity, and structure function relationships of insect luciferases JO - Cell Mol Life Sci VL - 59 UR - https://doi.org/10.1007/PL00012509 DO - 10.1007/PL00012509 ID - Viviani2002 ER - TY - JOUR AU - Lall, A. B. AU - Strother, G. K. AU - Cronin, T. W. AU - Seliger, H. H. PY - 1988 DA - 1988// TI - Modification of spectral sensitivities by screening pigments in the compound eyes of twilight-active fireflies (Coleoptera: Lampyridae) JO - J Comp Physiol A. VL - 162 UR - https://doi.org/10.1007/BF01342700 DO - 10.1007/BF01342700 ID - Lall1988 ER - TY - JOUR AU - Seliger, H. H. AU - Buck, J. B. AU - Fastie, W. G. AU - Mcelroy, W. D. PY - 1964 DA - 1964// TI - The spectral distribution of firefly light JO - J Gen Physiol VL - 48 UR - https://doi.org/10.1085/jgp.48.1.95 DO - 10.1085/jgp.48.1.95 ID - Seliger1964 ER - TY - JOUR AU - Thorne, N. AU - Inglese, J. AU - Auld, D. S. PY - 2010 DA - 2010// TI - Illuminating insights into firefly luciferase and other bioluminescent reporters used in chemical biology JO - Chem Biol VL - 17 UR - https://doi.org/10.1016/j.chembiol.2010.05.012 DO - 10.1016/j.chembiol.2010.05.012 ID - Thorne2010 ER - TY - JOUR AU - McElroy, W. D. AU - Seliger, H. H. AU - White, E. H. PY - 1969 DA - 1969// TI - Mechanism of bioluminescence, chemiluminescence and enzyme function in the oxidation of firefly luciferin JO - Photochem Photobiol VL - 10 UR - https://doi.org/10.1111/j.1751-1097.1969.tb05676.x DO - 10.1111/j.1751-1097.1969.tb05676.x ID - McElroy1969 ER - TY - JOUR AU - White, E. H. AU - Rapaport, E. AU - Seliger, H. H. AU - Hopkins, T. A. PY - 1971 DA - 1971// TI - The chemi- and bioluminescence of firefly luciferin: an efficient chemical production of electronically excited states JO - Bioorg Chem VL - 1 UR - https://doi.org/10.1016/0045-2068(71)90009-5 DO - 10.1016/0045-2068(71)90009-5 ID - White1971 ER - TY - STD TI - Deluca M, McElroy WD. [1] Purification and properties of firefly luciferase. Methods in Enzymology. Academic Press; 1978;57:3–15. http://www.sciencedirect.com/science/article/pii/0076687978570031. UR - http://www.sciencedirect.com/science/article/pii/0076687978570031 ID - ref77 ER - TY - JOUR AU - Green, J. W. PY - 1956 DA - 1956// TI - Revision of the nearctic species of Photinus (Coleoptera: Lampyridae) JO - Proc Calif Acad Sci VL - 28 ID - Green1956 ER - TY - BOOK AU - Sambrook, J. AU - Fritsch, E. F. AU - Maniatis, T. PY - 1989 DA - 1989// TI - Molecular cloning: a laboratory manual PB - Cold Spring Harbor Laboratory Press CY - New York ID - Sambrook1989 ER - TY - JOUR AU - Rozen, S. AU - Skaletsky, H. PY - 2000 DA - 2000// TI - Primer3 on the WWW for general users and for biologist programmers JO - Methods Mol. Biol. VL - 132 ID - Rozen2000 ER - TY - JOUR AU - Edgar, R. C. M. U. S. C. L. E. PY - 2004 DA - 2004// TI - multiple sequence alignment with high accuracy and high throughput JO - Nucleic Acids Res VL - 32 UR - https://doi.org/10.1093/nar/gkh340 DO - 10.1093/nar/gkh340 ID - Edgar2004 ER - TY - JOUR AU - Librado, P. AU - Rozas, J. PY - 2009 DA - 2009// TI - DnaSP v5: a software for comprehensive analysis of DNA polymorphism data JO - Bioinformatics VL - 25 UR - https://doi.org/10.1093/bioinformatics/btp187 DO - 10.1093/bioinformatics/btp187 ID - Librado2009 ER - TY - STD TI - Nei M. Molecular evolutionary genetics. New York: Columbia University Press; 1987. ID - ref83 ER - TY - JOUR AU - Hudson, R. R. AU - Slatkin, M. AU - Maddison, W. P. PY - 1992 DA - 1992// TI - Estimation of levels of gene flow from DNA sequence data JO - Genetics VL - 132 ID - Hudson1992 ER - TY - JOUR AU - Davey, J. W. AU - Hohenlohe, P. A. AU - Etter, P. D. AU - Boone, J. Q. AU - Catchen, J. M. AU - Blaxter, M. L. PY - 2011 DA - 2011// TI - Genome-wide genetic marker discovery and genotyping using next-generation sequencing JO - Nat Rev Genet VL - 12 UR - https://doi.org/10.1038/nrg3012 DO - 10.1038/nrg3012 ID - Davey2011 ER - TY - JOUR AU - Mastretta-Yanes, A. AU - Arrigo, N. AU - Alvarez, N. AU - Jorgensen, T. H. AU - Piñero, D. AU - Emerson, B. C. PY - 2015 DA - 2015// TI - Restriction site-associated DNA sequencing, genotyping error estimation and de novo assembly optimization for population genetic inference JO - Mo Ecol Resour VL - 15 UR - https://doi.org/10.1111/1755-0998.12291 DO - 10.1111/1755-0998.12291 ID - Mastretta-Yanes2015 ER - TY - JOUR AU - Graham, C. F. AU - Glenn, T. C. AU - McArthur, A. G. AU - Boreham, D. R. AU - Kieran, T. AU - Lance, S. PY - 2015 DA - 2015// TI - Impacts of degraded DNA on restriction enzyme associated DNA sequencing (RADSeq) JO - Mol Ecol Resour VL - 15 UR - https://doi.org/10.1111/1755-0998.12404 DO - 10.1111/1755-0998.12404 ID - Graham2015 ER - TY - JOUR AU - Catchen, J. AU - Hohenlohe, P. A. AU - Bassham, S. AU - Amores, A. AU - Cresko, W. A. PY - 2013 DA - 2013// TI - Stacks: an analysis tool set for population genomics JO - Mol Ecol VL - 22 UR - https://doi.org/10.1111/mec.12354 DO - 10.1111/mec.12354 ID - Catchen2013 ER - TY - JOUR AU - Wood, D. E. AU - Salzberg, S. L. PY - 2014 DA - 2014// TI - Kraken: ultrafast metagenomic sequence classification using exact alignments JO - Genome Biol VL - 15 UR - https://doi.org/10.1186/gb-2014-15-3-r46 DO - 10.1186/gb-2014-15-3-r46 ID - Wood2014 ER - TY - JOUR AU - Altschul, S. F. AU - Gish, W. AU - Miller, W. AU - Myers, E. W. AU - Lipman, D. J. PY - 1990 DA - 1990// TI - Basic local alignment search tool JO - J Mol Biol VL - 215 UR - https://doi.org/10.1016/S0022-2836(05)80360-2 DO - 10.1016/S0022-2836(05)80360-2 ID - Altschul1990 ER - TY - JOUR AU - Paradis, E. PY - 2010 DA - 2010// TI - pegas: an R package for population genetics with an integrated–modular approach JO - Bioinformatics VL - 26 UR - https://doi.org/10.1093/bioinformatics/btp696 DO - 10.1093/bioinformatics/btp696 ID - Paradis2010 ER - TY - JOUR AU - Beaumont, M. A. AU - Nichols, R. A. PY - 1996 DA - 1996// TI - Evaluating loci for use in the genetic analysis of population structure JO - Proc Roy Soc B VL - 263 UR - https://doi.org/10.1098/rspb.1996.0237 DO - 10.1098/rspb.1996.0237 ID - Beaumont1996 ER - TY - STD TI - Plummer M, Best N, Cowles K, Vines K. CODA: Convergence Diagnosis and Output Analysis for MCMC. R News. 2006;6(1):7–11. ID - ref93 ER - TY - JOUR AU - Nei, M. PY - 1978 DA - 1978// TI - Estimation of average heterozygosity and genetic distance from a small number of individuals JO - Genetics VL - 89 ID - Nei1978 ER - TY - JOUR AU - Pembleton, L. W. AU - Cogan, N. O. I. AU - Forster, J. W. PY - 2013 DA - 2013// TI - StAMPP: an R package for calculation of genetic differentiation and structure of mixed-ploidy level populations JO - Mol Ecol Resour VL - 13 UR - https://doi.org/10.1111/1755-0998.12129 DO - 10.1111/1755-0998.12129 ID - Pembleton2013 ER - TY - JOUR AU - Paradis, E. AU - Claude, J. AU - Strimmer, K. A. P. E. PY - 2004 DA - 2004// TI - Analyses of Phylogenetics and Evolution in R language JO - Bioinformatics VL - 20 UR - https://doi.org/10.1093/bioinformatics/btg412 DO - 10.1093/bioinformatics/btg412 ID - Paradis2004 ER - TY - JOUR AU - Jombart, T. AU - Ahmed, I. PY - 2011 DA - 2011// TI - Adegenet 1.3-1: new tools for the analysis of genome-wide SNP data JO - Bioinformatics VL - 27 UR - https://doi.org/10.1093/bioinformatics/btr521 DO - 10.1093/bioinformatics/btr521 ID - Jombart2011 ER - TY - JOUR AU - Pritchard, J. K. AU - Stephens, M. AU - Donnelly, P. PY - 2000 DA - 2000// TI - Inference of population structure using multilocus genotype data JO - Genetics VL - 155 ID - Pritchard2000 ER - TY - JOUR AU - Kopelman, N. M. AU - Mayzel, J. AU - Jakobsson, M. AU - Rosenberg, N. A. AU - Mayrose, I. PY - 2015 DA - 2015// TI - Clumpak: a program for identifying clustering modes and packaging population structure inferences across K JO - Mol Ecol Resour VL - 15 UR - https://doi.org/10.1111/1755-0998.12387 DO - 10.1111/1755-0998.12387 ID - Kopelman2015 ER - TY - JOUR AU - Evanno, G. AU - Regnaut, S. AU - Goudet, J. PY - 2005 DA - 2005// TI - Detecting the number of clusters of individuals using the software structure: a simulation study JO - Mol Ecol VL - 14 UR - https://doi.org/10.1111/j.1365-294X.2005.02553.x DO - 10.1111/j.1365-294X.2005.02553.x ID - Evanno2005 ER - TY - JOUR AU - Jakobsson, M. AU - Rosenberg, N. A. PY - 2007 DA - 2007// TI - CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure JO - Bioinformatics VL - 23 UR - https://doi.org/10.1093/bioinformatics/btm233 DO - 10.1093/bioinformatics/btm233 ID - Jakobsson2007 ER - TY - JOUR AU - Rosenberg, N. A. PY - 2003 DA - 2003// TI - distruct: a program for the graphical display of population structure JO - Mol Ecol Notes VL - 4 UR - https://doi.org/10.1046/j.1471-8286.2003.00566.x DO - 10.1046/j.1471-8286.2003.00566.x ID - Rosenberg2003 ER - TY - STD TI - Kahle D, Wickham H, ggmap. Spatial Visualization with ggplot2 [Internet]. R J. 2013:144–61. Available from: http://journal.r-project.org/archive/2013-1/kahle-wickham.pdf. UR - http://journal.r-project.org/archive/2013-1/kahle-wickham.pdf ID - ref103 ER - TY - JOUR AU - Tajima, F. PY - 1989 DA - 1989// TI - Statistical method for testing the neutral mutation hypothesis by DNA polymorphism JO - Genetics VL - 123 ID - Tajima1989 ER -