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Table 5 Population statistics for variant and invariant sites for sympatric populations of P. australiana (P. aus) and P. xylostella (P. x) from five locations

From: Cryptic Plutella species show deep divergence despite the capacity to hybridize

Population

Species

n

Sites

Site depth

SNPs

Indels

Private sites

H o

H s

F is

Boomi NSW

P. aus

11.1

276939

40

7198

1112

212

0.013

0.015

0.089

 

P. x

9.4

282989

42

4316

549

30

0.009

0.010

0.039

Calca SA

P. aus

8.7

261496

30

6629

989

210

0.014

0.015

0.059

 

P. x

8.2

274973

42

4126

538

40

0.009

0.010

0.050

Esperance WA

P. aus

4.5

269268

28

6543

998

210

0.016

0.015

-0.032

 

P. x

11.0

275299

35

4046

520

23

0.010

0.010

0.019

Gilgandra NSW

P. aus

15.7

277136

39

7154

1088

212

0.014

0.015

0.079

 

P. x

1.9

277846

42

4149

505

28

0.009

0.009

-0.056

Goulburn NSW

P. aus

6.8

256343

29

6471

968

190

0.013

0.015

0.058

 

P. x

12.8

274700

36

4052

513

26

0.009

0.010

0.052

  1. n, number of individuals genotyped per locus; Ho, observed heterozygosity; Hs, gene diversity; Fis, Nei’s inbreeding coefficient