Skip to main content

Table 3 Sample specifications

From: RNA sequencing of early round goby embryos reveals that maternal experiences can shape the maternal RNA contribution in a wild vertebrate

 

Water temperature on 5 days before sampling day (°C)

 

Sample number

Sampling date

Developmental stage

Mean

Maximum

Minimum

Median

Interval

Mean water temperature on sampling day (°C)

Sequencing library

Individual dissimilarity

Raw read pairs

QF read pairs

% retained

% total

2

15-May-15

8-cell stage

15.30

16.56

13.94

15.20

2.62

16.06

1

0.865

23,797,396

23,679,970

99.5

5.3

50

1-Jun-15

1 cell stage

15.54

16.38

14.48

15.63

1.90

16.49

1

0.805

47,705,400

47,500,770

99.6

10.7

28

22-May-15

4-cell stage

15.58

16.28

14.76

15.64

1.52

14.84

2

0.915

20,373,120

19,616,406

96.3

4.4

30

22-May-15

32-cell stage

15.58

16.28

14.76

15.64

1.52

14.84

1

0.76

26,604,709

26,292,764

98.8

5.9

70

3-Jun-15

16–32 cell stage

16.19

17.28

15.26

16.10

2.02

17.55

2

1.106

40,054,067

39,820,682

99.4

8.9

80

8-Jun-15

16–32 cell stage

17.00

18.68

15.72

16.90

2.96

19.01

2

0.9

50,809,855

50,559,355

99.5

11.4

132

26-Jun-15

4–8 cell stage

18.25

19.22

17.50

18.24

1.72

18.80

1

0.83

16,474,441

15,903,806

96.5

3.6

135

26-Jun-15

1-cell stage

18.25

19.22

17.50

18.24

1.72

18.80

1

1.165

31,063,597

30,915,991

99.5

6.9

98

5-Jun-15

1–2 cell stage

19.01

21.46

17.14

18.96

4.32

20.70

2

0.785

49,901,005

49,640,357

99.5

11.2

123

22-Jun-15

16-cell stage

19.03

19.74

18.22

19.08

1.52

18.35

2

1.015

21,550,669

21,364,189

99.1

4.8

127

22-Jun-15

2-cell stage

19.03

19.74

18.22

19.08

1.52

18.35

2

1.095

20,752,958

20,628,391

99.4

4.6

147

3-Jul-15

1-cell stage

20.66

23.06

19.42

20.38

3.64

22.54

1

1.12

20,273,141

20,149,106

99.4

4.5

148

3-Jul-15

16-cell stage

20.66

23.06

19.42

20.38

3.64

22.54

1

1.105

40,050,217

39,840,710

99.5

9.0

167

10-Jul-15

4-cell stage

23.95

24.60

23.30

23.98

1.30

23.16

2

0.76

24,849,517

24,685,544

99.3

5.5

141

3-Jul-15

prim stage

20.66

23.06

19.42

20.38

3.64

22.54

1

NA

14,498,531

14,346,106

98.9

3.2