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Table 3 Mean number of clades with a given support, posterior probability (PP) or bootstrap percentage (BP) obtained by different methods for particular markers

From: The influence of molecular markers and methods on inferring the phylogenetic relationships between the representatives of the Arini (parrots, Psittaciformes), determined on the basis of their complete mitochondrial genomes

Marker 7 taxa 11 taxa
PP > 0.70 or BP > 50 PP > 0.95 or BP > 70 PP > 0.99 or BP > 90 PP > 0.70 or BP > 50 PP > 0.95 or BP > 70 PP > 0.99 or BP > 90
12 s rRNA 1.88 0.00 0.00 3.38 1.38 1.00
16 s rRNA 0.88 0.38 0.00 4.25 1.25 1.00
atp6 0.63 0.00 0.00 2.50 1.25 0.38
atp8 1.13 0.00 0.00 2.88 1.13 0.13
cox1 1.25 0.34 0.00 2.50 1.13 1.00
cox2 1.25 0.00 0.00 1.75 0.75 0.38
cox3 1.25 0.00 0.00 2.13 1.13 0.63
CR 3.38 2.88 1.38 7.25 4.88 3.63
cytb 1.13 0.00 0.00 3.00 1.38 1.00
nd1 1.88 1.00 0.00 3.00 2.75 1.13
nd2 0.13 0.00 0.00 2.88 2.50 1.25
nd3 0.63 0.00 0.00 1.50 0.00 0.00
nd4 2.25 0.50 0.00 3.38 1.13 0.50
nd4L 1.13 0.50 0.00 1.00 0.00 0.00
nd5 0.25 0.00 0.00 4.25 2.38 1.25
nd6 0.63 0.00 0.00 1.63 1.00 0.88
tRNA1 2.63 1.13 0.00 2.75 0.00 0.00
tRNA2 2.00 0.63 0.13 3.63 1.38 0.38
  1. The maximum number of possible clades that can receive any support is 4 for 7-taxa set and 8 for 11-taxa set