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Table 2 MiSp transcript abundance based on read counts in minor ampullate, major ampullate, and total silk gland RNA-seq libraries

From: Duplication and concerted evolution of MiSp-encoding genes underlie the material properties of minor ampullate silks of cobweb weaving spiders

 

L. geometricus

L. hesperus

RNA-seq Library

Total readsa

MiSp_v2

MiSp_v1

Ratioc

Ratio 3’d

Total readsb

MiSp_v2

MiSp_v1

Ratioc

Ratio 3’d

Minor 1

4832818

275164

57912

4.8

2.6

11679960

5289870

1487650

3.6

3.6

Minor 2

20640831

3496061

564983

6.2

4.2

11148437

4919531

1443331

3.4

3.4

Total Silk

8101748

61016

72774

0.8

0.9

15093424

572185

183028

3.1

4.3

Major 1

13978630

1943

4493

0.4

0.3

6116968

68

24

2.8

2.7

Major 2

13636997

69

9

7.7

5.5

9574596

315

85

3.7

4.4

  1. See Table 1 for accession numbers
  2. a Raw RNA-seq reads are available on NCBI’s SRA database: SRR1539569
  3. b Raw RNA-seq reads are available on NCBI’s SRA database: SRR1539570
  4. c Ratio of MiSp_v2 to MiSp_v1 based on counts of reads aligned to the entire sequences
  5. d Ratio of MiSp_v2 to MiSp_v1 based on counts of reads aligned to the 3’-most 500 bases of coding sequences. See Methods for rationale