Genetic basis of allochronic differentiation in the fall armyworm

Table 1 Variation in the regulatory intron in the 5’UTR of vri

Position	Close to	Type	Population		Individual
Position	Close to	Type	CL_1 Corn	RL_1 Rice	mgmA Rice	mgmB Corn
4717	EboxE	SNP	T	A	A	T
4727	EboxE	SNP	T	A	A	T
4816	EboxE	IN/DEL	_ _ _ _ _ _	TTCGAA	TTCGAA	_ _ _ _ _ _
4870	EboxF	SNP	A	C	C	A
6690	EboxI	SNP	T	A	A	n.a.

Single nucleotide polymorphisms (SNPs) and insertions/deletion (IN/DEL) between 12 individuals from a corn-strain population (CL_1) and 12 individuals from a rice-strain population (RL_1) as well as in the maternal grandmothers (mgm) of BC_A and B (originating from these populations). Mgm = maternal grandmother; Sample name followed by Corn (= corn-strain) or Rice (= rice-strain); n.a. not available due to sequencing restrictions

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