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Table 2 Residues in mosquito long wavelength opsins predicted under positive selection

From: Retention of duplicated long-wavelength opsins in mosquito lineages by positive selection and differential expression

Gene Amino acid residue
N-terminus (extracellular) Trans-membrane domain III C-terminus (intracellular)
Clade 4
AaGPRop5 G5* M8* V17 A18 S19* M128 Q357 V366 K373*
AaGPRop4 G5* M8* V17 A18 S19* M128 Q357 V366 K373*
CqGPRop10 A5* A10* A13 V14 A15* M124 Q340 V349 -
CqGPRop13 A5* T8* A16 A17 M18* M127 Q356 I365 I372*
CqGPRop8 A5* N8 A16 M17 V18* M127 Q356 V365 S372
CqGPRop9 A5* N8 A16 M17 V18* M127 Q356 V365 S372
AaGPRop3 Q10* Q14 A16 A17 T18* M127 Q356 V365 S372
AgGPRop6 S10* Q14 V16 V17 S18 M127 Q356 V365 A372
Clade 3
CqGPRop6 D10 Q13 G15 N16 G17 C126* D355* S367 -
CqGPRop5 D10 Q13 G15 A16 G17 C126* D355* E364* -
AaGPRop2 D10 Q13 A15 G16 G17 C126* N357* T366 -
AaGPRop1 D10 - S14 S15 G16 M125 N358* T367 -
AgGPRop4 D10 T13 S15* G16 G17 M126 G355* Q364 -
AgGPRop1 D10 T13 G15* S16 G17 M126 G355* Q364 -
AgGPRop3 D10 T13 S15* G16 G17 M126 G355* Q364 -
  1. The asterisk (*) indicates residues under positive selection (Fitmodel analysis). The phylogenetic relationship of genes under positive selection is shown in Fig. 2. The residue number was derived by numbering from the first amino acid of each sequence (note that the B. taurus and T. pacificus rhodopsins were not used as reference to number the residues); -, indicates a gap inserted in the alignment and thus, a residue is not available at this position
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BMC Ecology and Evolution

ISSN: 2730-7182

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