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Table 4 Major motifs in the predicted kinase domains of LRR-RLKs

From: Origin and diversification of leucine-rich repeat receptor-like protein kinase (LRR-RLK) genes in plants

Subdomains

Motifs

Sequences

I

Q_M3

GxGgfGxV YK/rA/GxLxd

II

Q_M4

GxxVA V/iKrLxxxxxx

III & IV

Q_M1

xEvexL/igxv/irHrNL/iVxLxGYC

V

Q_M2

LVYE/dY/fMpNGSLxxxL

Q_M5

S/tiDxxGND/EF K A

VIa

Z_M2

WxxRlxIAlG/da/vArG/aLxY LHxx

VIb & VII

Z-M1

PxIv/iHRDi/v/lKsSN I/vLL DxxfeA/pkV/i/la/sD F G LA/sk/r

Z_M5

xxxxxT/sHV

VIII

Z_M3

stxvaGTxGYi/lAPE Y

Z_M4

xT/sxKsDV Y/f

IX

H_M1

KsDV Y/fSF/yG V/iV/lL LELl/v/iTGk/rxPx

H_M3

xxxxxL/ivxWV/a

H_M10

eYxEd/eDVVi/vLcDhV R/k

H_M9

P QLHDI

H_M4

xxxxxv/ivDpxL

H_M5

gdYDxxSVW K/ra/v

H_M6

xxxEeEMv/lxvL

H_M7

xYPAKSLS R FA

H_M8

eY/FxxxEV/axrm/vI

XI

H_M2

xl/i/vA/glxCtxxxPxxRPxMxeVV

  1. If the bits value of the amino acid at this position is smaller than 0.5, it is represented with x; 1 > bits ≥ 0.5, with a lowercase letter; 2 > bits ≥ 1, with a capital letter; 3 > bits ≥ 2, with a bold capital letter; bits ≥ 3, with an underlined bold capital letter