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Table 2 Abundance of EC classes in enzymes PM* and enzymes SM*

From: Assessing in silico the recruitment and functional spectrum of bacterial enzymes from secondary metabolism

EC Class

Enzyme Function

f PM *

f SM *

f Ecoli

f Myco

1

Oxidoreductases

18.71

22.10

19.86

8.38

2

Transferases

35.25

36.33

33.57

41.32

3

Hydrolases

17.25

11.64

25.13

22.16

4

Lyases

10.70

17.28

9.45

2.99

5

Isomerases

6.67

6.81

6.41

8.38

6

Ligases

11.42

5.84

5.58

16.77

  1. f PM *- and f SM *-values are the normalized frequencies for the occurrence of EC classes in the datasets enzymes PM* and enzymes SM* . f Ecoli and f Myco are the frequencies of EC classes deduced from the genomes of E. coli and M. genitalium
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BMC Ecology and Evolution

ISSN: 2730-7182

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