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Fig. 2 | BMC Evolutionary Biology

Fig. 2

From: Assessing in silico the recruitment and functional spectrum of bacterial enzymes from secondary metabolism

Fig. 2

Multifunctionality deduced from homologous PM*/SM* pairs and determined for EC classes. The nodes represent the six EC classes and arrows indicate the relation of functional difference PM* → SM*. For example, the arrow 6 → 2 signals that PM* homologs of SM* class 2 enzymes belong to EC class 6; this arrow is marked with a ♦ symbol. The width of the arrows represents the number of BLAST hits of enzymes from enzymes SM* in enzymes PM* and their color the mean E-value; hits were binned as indicated. In addition, for each class, the number of PM* BLAST hits is given and the rate of functional conservation fc, which is the fraction of PM* BLAST hits that belong to the same EC class as the SM* queries. The class EC 1 subsumes oxidoreductases that catalyze oxidation/reduction reactions and EC 2 transferases that transfer functional groups. EC 3 consists of hydrolases that catalyze the formation of two products from a substrate by hydrolysis and EC 4 contains lyases that catalyze the non-hydrolytic addition or removal of groups. The isomerases of EC 5 catalyze the intramolecular rearrangement within a single molecule and the ligases of EC 6 join together two molecules under consumption of ATP or similar triphosphates

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