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Table 1 Phyletic patterns of RH50 and AMT genes

From: Horizontal gene transfer drives the evolution of Rh50 permeases in prokaryotes

Taxonomya

Species

Statusb

RH50

AMT

Euryarchaeota/Methanomicrobia/Methanomassiliicoccales

Methanomassiliicoccus luminyensis B10

S/C

1

1

Ca. Methanomassiliicoccus intestinalis Issoire-Mx1

Chr

1

0

Euryarchaeota/Methanomicrobia/Methanosarcinales

Methanosalsum zhilinae WeN5 DSM 4017

Chr

1

1

Bacteria/Planctomycetes

Ca. Kuenenia stuttgartiensis

C

1

4

Planctomycetaceae bacterium KSU-1

S/C

1

7

Ca. Brocadia anammoxidans (WQC04)c

nd

1

5

Bacteria/Proteobacteria/Betaproteobacteria

Nitrosomonas europaea ATCC 19718

Chr

1

0

Nitrosomonas sp. Is79A3

Chr

1

0

Nitrosomonas sp. AL212

Chr

1

0

Nitrosospira multiformis ATCC 25196

Chr

1

0

Nitrosospira briensis C-128

PD

1

0

Nitrosospira sp. APG3

S/C

1

0

Bacteria/Proteobacteria/Deltaproteobacteria

Geobacter sp. M21

Chr

1

2

Bacteria/Firmicutes/Clostridia/Clostridiales/Clostridiaceae

Clostridium papyrosolvens DSM 2782

S/C

1

3

Clostridium papyrosolvens C7

S/C

1

2

Clostridium cellulovorans 743B

Chr

1

2

Clostridium carboxidivorans P7

S/C

1

1

Clostridium viride DSM6836

PD

1

0

Clostridium sp. BNL1100

Chr

1

2

Clostridium scatologenes ATCC 25775

PD

1

3

Bacteria/Firmicutes/Clostridia/Clostridiales/Eubacteriaceae

Eubacterium acidaminophilum al-2, DSM 3953

C

1

0

Bacteria/Firmicutes/Clostridia/Clostridiales/Peptococcaceae

Dehalobacter sp. 11DCA

Chr

1

2

Desulfotomaculum acetoxidans DSM 771

Chr

1

3

Bacteria/Firmicutes/Clostridia/Clostridiales/Peptostreptococcaceae

Clostridium litorale W6

PD

1

0

Bacteria/Firmicutes/Clostridia/Clostridiales/Ruminococcaceae

Acetivibrio cellulolyticus CD2

S/C

1

3

Bacteroides cellulosolvens DSM 2933

PD

1

4

Bacteria/Firmicutes/Clostridia/Halanaerobiales

Acetohalobium arabaticum DSM 5501

Chr

1

1

Bacteria/Firmicutes/Clostridia/Clostridiales/Family XIII incertae sedis

Anaerovorax odorimutans DSM 5092

PD

1

0

Bacteria/Actinobacteria

Citricoccus sp. CH26A

S/C

1

1

Bacteria/Fibrobacteres-Acidobacteria group

Candidatus Koribacter versatilis Ellin345

Chr

1

2

Eukaryota/Parabasalia

Trichomonas vaginalis G3

S/C

3

0

  1. aNCBI taxonomy, except for Methanomassiliicoccales [34]
  2. bGenome status. NCBI (Chr = Chromosome; S/C = Scaffolds/Contigs). IMG (C = Complete; PD = Permanent Draft)
  3. cThe Brocadia genome (NCBI taxid:174632) was removed from the JGI-IMG database on March 2014