Table 2 Bayesian estimates of evolutionary and population dynamic parameters of the HIV-1 CRF11_cpx clade
From: Time-scale of minor HIV-1 complex circulating recombinant forms from Central and West Africa
Gene | Coalescent | μ (subst./site/year) | TMRCA | r (year−1) |
|---|---|---|---|---|
pol | Bayesian skyline | 1.6 × 10−3 (1.5 × 10−3–2.0 × 10−3) | 1961 (1953–1970) | - |
Logistic growth | 1.6 × 10−3 (1.5 × 10−3–1.9 × 10−3) | 1958 (1951–1967) | 0.27 (0.21–0.35) | |
env | Bayesian skyline | 4.9 × 10−3 (4.2 × 10−3 – 5.8 × 10−3) | 1957 (1954–1961) | - |
Logistic growth | 4.9 × 10−3 (4.2 × 10−3 – 5.7 × 10−3) | 1957 (1953–1961) | 0.28 (0.21–0.35) |