Table 1 Ancestral character states estimated using MCMC models for six leaflet anatomical traits of Oxalis
From: The phylogenetic significance of leaf anatomical traits of southern African Oxalis
Clade1 | Clade2 | Clade3 | Clade4 | Clade5 | Clade6 | Clade7 | Clade7b | Clade8 | Clade9 | Clade10 | Clade11 | Clade12 | Clade13 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Trait 1 (ER model) | ||||||||||||||
Irregular AD cells (crown) | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 0.98 | 0.01 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 |
Swollen AD cells (crown) | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.02 | 0.99 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
Irregular AD cells (stem) | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 0.01 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 |
Swollen AD cells (stem) | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.99 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
Trait 2 (ER model) | ||||||||||||||
Irregular AB cells (crown) | 0.18 | 0.01 | 0.00 | 0.98 | 1.00 | 1.00 | 0.98 | 0.02 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 |
Swollen AB cells (crown) | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.02 | 0.98 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
Semi-swollen AB cells (crown) | 0.82 | 0.99 | 1.00 | 0.02 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
Irregular AB cells (stem) | 0.16 | 0.05 | 0.05 | 0.18 | 1.00 | 0.99 | 1.00 | 0.02 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 |
Swollen AB cells (stem) | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.98 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
Semi-swollen AB cells (stem) | 0.83 | 0.94 | 0.94 | 0.82 | 0.00 | 0.01 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
Trait 3 (ER model) | ||||||||||||||
Epistomaty (crown) | 0.01 | 0.00 | 0.00 | 0.70 | 0.54 | 0.99 | 0.98 | 0.01 | 0.99 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 |
Hypostomaty (crown) | 0.99 | 1.00 | 1.00 | 0.30 | 0.46 | 0.01 | 0.00 | 0.00 | 0.01 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
Amphistomaty (crown) | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.02 | 0.99 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
Epistomaty (stem) | 0.01 | 0.00 | 0.00 | 0.01 | 0.54 | 0.99 | 0.99 | 0.01 | 0.99 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 |
Hypostomaty (stem) | 0.99 | 1.00 | 1.00 | 0.99 | 0.46 | 0.01 | 0.01 | 0.00 | 0.01 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
Amphistomaty (stem) | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.99 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
Trait 4 (SYM model - 82 %) | ||||||||||||||
Bifacial (crown) | 0.99 | 0.97 | 1.00 | 1.00 | 0.98 | 1.00 | 1.00 | 1.00 | 1.00 | 0.85 | 0.56 | 0.00 | 0.00 | 0.00 |
Isobilateral (crown) | 0.01 | 0.03 | 0.00 | 0.00 | 0.02 | 0.00 | 0.00 | 0.00 | 0.00 | 0.15 | 0.44 | 0.01 | 1.00 | 0.01 |
Homogenous (crown) | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.99 | 0.00 | 0.99 |
Bifacial (stem) | 0.97 | 0.99 | 0.99 | 0.99 | 0.98 | 1.00 | 1.00 | 1.00 | 1.00 | 0.85 | 0.85 | 0.55 | 0.24 | 0.00 |
Isobilateral (stem) | 0.03 | 0.01 | 0.01 | 0.01 | 0.02 | 0.00 | 0.00 | 0.00 | 0.00 | 0.15 | 0.15 | 0.45 | 0.76 | 0.01 |
Homogenous (stem) | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.99 |
Trait 4 (ARD model - 18 %) | ||||||||||||||
Bifacial (crown) | 0.00 | 0.53 | 1.00 | 0.00 | 0.68 | 0.00 | 0.28 | 0.36 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
Isobilateral (crown) | 0.00 | 0.15 | 0.00 | 0.00 | 0.21 | 0.42 | 0.45 | 0.49 | 0.51 | 0.02 | 0.00 | 0.00 | 0.92 | 0.00 |
Homogenous (crown) | 1.00 | 0.32 | 0.00 | 1.00 | 0.11 | 0.58 | 0.26 | 0.15 | 0.49 | 0.98 | 1.00 | 1.00 | 0.08 | 1.00 |
Bifacial (stem) | 0.00 | 0.13 | 0.13 | 0.00 | 0.68 | 0.00 | 0.00 | 0.36 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
Isobilateral (stem) | 0.00 | 0.06 | 0.02 | 0.00 | 0.21 | 0.06 | 0.42 | 0.49 | 0.51 | 0.02 | 0.00 | 0.00 | 0.58 | 0.00 |
Homogenous (stem) | 1.00 | 0.81 | 0.81 | 1.00 | 0.11 | 0.94 | 0.58 | 0.15 | 0.49 | 0.98 | 1.00 | 1.00 | 0.42 | 1.00 |
Trait 5 (ER model) | ||||||||||||||
Sheath absent (crown) | 0.49 | 0.56 | 0.50 | 0.47 | 0.45 | 0.41 | 0.48 | 0.52 | 0.37 | 0.33 | 0.17 | 0.07 | 0.11 | 0.42 |
Sheath present (crown) | 0.51 | 0.44 | 0.50 | 0.53 | 0.55 | 0.59 | 0.52 | 0.48 | 0.63 | 0.67 | 0.83 | 0.93 | 0.89 | 0.58 |
Sheath absent (stem) | 0.49 | 0.51 | 0.51 | 0.49 | 0.45 | 0.44 | 0.41 | 0.52 | 0.37 | 0.33 | 0.33 | 0.16 | 0.11 | 0.42 |
Sheath present (stem) | 0.51 | 0.49 | 0.49 | 0.51 | 0.55 | 0.56 | 0.59 | 0.48 | 0.63 | 0.67 | 0.67 | 0.84 | 0.89 | 0.58 |
Trait 6 (ARD model) | ||||||||||||||
Flat leaflet (crown) | 0.00 | 0.65 | 0.00 | 0.00 | 0.81 | 0.00 | 0.74 | 0.94 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
Conduplicate leaflet (crown) | 1.00 | 0.35 | 1.00 | 1.00 | 0.19 | 1.00 | 0.26 | 0.06 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 |
Flat leaflet (stem) | 0.00 | 0.00 | 0.00 | 0.00 | 0.81 | 0.00 | 0.00 | 0.94 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
Conduplicate leaflet stem) | 1.00 | 1.00 | 1.00 | 1.00 | 0.19 | 1.00 | 1.00 | 0.06 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 |