Data set (n = 38) | bp |
K
|
S
|
S
i
| %S
i
| Model |
---|
cox1
| 658 | 38 | 237 | 217 | 33 | GTR + Γ + I |
16S | 511 | 36 | 67 | 45 | 9 | GTR + Γ + I |
PEPCK | 557 | 37 | 154 | 94 | 17 | HKY + Γ |
EF-1α | 139 | 24 | 27 | 12 | 9 | K2P + Γ |
wg | 463 | 27 | 31 | 11 | 2 | GTR + I |
mitochondrial | 1169 | 38 | 304 | 262 | 22 | Â |
nuclear | 1147 | 37 | 212 | 120 | 10 | Â |
combined | 2316 | 38 | 516 | 383 | 17 | Â |
-
n = number of sequences, bp = size of aligned matrices, K = number of haplotypes (cox1, 16S) or genotypes (PEPCK, EF-1α, wg) or a combination of both (combined), S = number of polymorphic sites, S
i = number of parsimony-informative sites, Model = best evolutionary model selected following the second-order Akaike information criterion (AICc). Concatenated matrices were examined with partitioned analysis using the best model for each gene fragment (see Methods)