Skip to main content

Table 2 Diptera genomes and transcriptomes used to develop probe kit

From: Anchored enrichment dataset for true flies (order Diptera) reveals insights into the phylogeny of flower flies (family Syrphidae)

Analysis Name

Genus

Specific Epithet

Type

Source

Accession

 

aedAeg

Aedes

aegypti

Genome

NCBI

AAGE02000001

http://www.ncbi.nlm.nih.gov/genome/44

anoGam

Anopheles

gambiae

Genome

NCBI

CM000360

http://www.ncbi.nlm.nih.gov/genome/46

culQui

Culex

quinquefasciatus

Genome

NCBI

AAWU01000001

http://www.ncbi.nlm.nih.gov/genome/393

droMel

Drosophila

melanogaster

Genome

NCBI

AABU01000001

http://www.ncbi.nlm.nih.gov/genome/47

lutLon

Lutzomyia

longipalpis

Genome

HGSC

AJWK01000001

ftp://ftp.hgsc.bcm.edu/Llongipalpis/

mayDes

Mayetiola

destructor

Genome

NCBI

AEGA01000001

http://www.ncbi.nlm.nih.gov/genome/2619

phlPap

Phlebotomus

papatasi

Genome

WUSTL

AJVK01000001

http://genome.wustl.edu/genomes/view/phlebotomus_papatasi

Anabarhynchus

Anabarhynchus

dentiphallus

Transcriptome

1kite.org

unpublished

http://1kite.org project ID# INSswpTBHRAAPEI-35

Bibio

Bibio

marci

Transcriptome

1kite.org

GATJ02

http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=GATJ02

Bombylius

Bombylius

major

Transcriptome

1kite.org

GATI02

http://www.ncbi.nlm.nih.gov/Traces/wgs//?val=GATI02

Chrysosoma

Heteropsilopus

ingenuus

Transcriptome

1kite.org

unpublished

http://1kite.org project ID# INSswpTAIRAAPEI-19

Episyrphus

Episyrphus

balteatus

Transcriptome

1kite.org

unpublished

http://1kite.org project ID# INSnfrTAWRAAPEI-11

Exaireta

Exaireta

spinigera

Transcriptome

1kite.org

unpublished

http://1kite.org project ID# INSswpTAERAAPEI-15

Lipara

Lipara

lucens

Transcriptome

1kite.org

GAZD02

http://www.ncbi.nlm.nih.gov/Traces/wgs//?val=GAZD02

Meroplius

Meroplius

fasciculatus

Transcriptome

1kite.org

unpublished

http://1kite.org project ID# INSytvTAARAAPEI-9

Sicus

Sicus

ferrugineus

Transcriptome

1kite.org

unpublished

http://1kite.org project ID# INShkeTARRAAPEI-46

Triarthria

Triarthria

setipennis

Transcriptome

1kite.org

GAVA02

http://www.ncbi.nlm.nih.gov/Traces/wgs//?val=GAVA02

Trichocera

Trichocera

saltator

Transcriptome

1kite.org

GAXZ02

http://www.ncbi.nlm.nih.gov/Traces/wgs//?val=GAXZ02

Chrysops

Chrysops

vittatus

Transcriptome

Wiegmann

unpublished

Wiegmann Lab, NCSU; Pers. Comm..

Empis

Empis

snoddyi

Transcriptome

Wiegmann

unpublished

Wiegmann Lab, NCSU; Pers. Comm..

Muscidae

Musca

domestica

Transcriptome

Wiegmann

unpublished

Wiegmann Lab, NCSU; Pers. Comm..