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Table 2 Error correction increases the mapping concordance for transcriptome NvecRef32743

From: Do novel genes drive morphological novelty? An investigation of the nematosomes in the sea anemone Nematostella vectensis

Samplea Raw reads (paired) Reads remaining after trimmingb Reads remaining after trimming & Error Correctionc Reads alignedd – Trimmed only Reads aligned – Trimmed & Error Corrected
M3 49,390,203 49,377,414 46,888,223 39,768,569 (81 %) 43,249,696 (92 %)
M4 47,477,373 47,466,721 44,704,490 36,255,081 (76 %) 39,339,951 (88 %)
Mes 26,632,325 26,615,206 25,785,788 24,435,421 (92 %) 24,380,462 (95 %)
N1 47,788,007 47,770,601 44,558,275 36,611,388 (77 %) 39,656,864 (89 %)
N2 53,500,454 53,483,271 50,693,980 42,513,852 (79 %) 45,609,374 (90 %)
Nem 20,135,090 20,073,479 19,174,413 17,995,873 (90 %) 17,834,121 (93 %)
T3 47,683,996 47,670,541 44,585,027 27,963,673 (77 %) 39,854,556 (89 %)
T4 50,314,893 50,300,293 47,474,608 40,154,724 (80 %) 43,557,953 (92 %)
Ten 21,803,901 21,788,366 20,983,324 19,474,441 (89 %) 19,384,395 (92 %)
  1. aSamples M3, M4, Mes are from mesenteries; N1, N2, Nem are from nematosomes; T3, T4, Ten are from tentacles. bTrimming was performed using Trimmomatic [52]. cError correction was performed using the ErrorCorrectReads utility from AllPaths-LG [53]. dAlignments were performed using Bowtie2 [54]