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Table 1 WXG-FtsK and ESX gene clusters identified in sequenced mycobacterial and selected actinobacterial species

From: The plasmid-mediated evolution of the mycobacterial ESX (Type VII) secretion systems

Species

WXG_FtsK

Genomic ESX

Plasmid ESX

 

4

4ev

3

1

2

5

P1

P2

P3

P2′

P5

Bacillus subtilis subsp. subtilis str. 168

x

           

Catenulispora acidiphila DSM43021

 

xxxx

          

Corynebacterium diphtheriae NCTC 13129

 

x

          

Corynebacterium pseudotuberculosis FRC41

 

x

          

Frankia alni ACN14a

 

x

          

Gordonia bronchialis DSM 43247

 

x

          

Janibacter sp. HTCC2649

 

x

          

Kribbella flavida DSM17836

 

xx

          

Listeria monocytogenes L312

x

           

M. abscessus

 

x

 

x

        

M. abscessus subsp. bolletii 50594

  

x

x

    

x

   

M. africanum GM041182

 

x

 

x

x

x

x

     

M. avium 104

 

x

 

x

 

x

x

     

M. avium paratuberculosis K-10

 

x

 

x

 

x

x

     

M. bovis AF2122/97

 

x

 

x

x

x

x

     

M. bovis BCG Pasteur 1173P2

 

x

 

x

xb

x

x

     

M. canettii CIPT140010059

 

x

 

x

x

x

x

     

M. chubuense

 

x

  

x

     

xx

 

M. colombiense CECT3035a

 

x

 

x

 

x

x

     

M. fortuitum subsp. fortuitum DSM 46621a

 

x

x

x

x

       

M. gilvum PYR-GCK

 

x

 

x

x

  

x

    

M. indicus pranii MTCC9506

 

x

 

x

 

x

x

     

M. intracellulare ATCC13950

 

x

 

x

 

x

x

     

M. kansasii ATCC12478a

 

x

 

x

x

x

x

     

M. leprae TN

   

x

x

 

x

     

M. ulcerans subsp. liflandii 128FXT

 

x

 

x

x

 

x

     

M. marinum M

 

x

 

x

x

 

x

     

M. massiliense CCUG48898a

 

x

 

x

        

M. microti 19422a

 

x

 

x

xb

x

x

     

M. neoaurum VKM Ac-1815D

 

x

 

x

x

       

M. orygis 112400015

 

x

 

x

x

x

x

     

M. parascrofulaceum BAA-614a

 

x

 

x

 

x

x

 

x

 

x

x

M. phlei RIVM601170a

 

x

 

x

x

       

M. rhodesiae NBB3a

 

x

 

x

x

       

M. smegmatis mc2155

 

x

 

x

x

       

M. sp. JDM601

 

x

 

x

 

x

x

     

M. sp. JLS

 

x

 

x

x

       

M. sp. KMS

 

x

 

x

x

   

x

x

  

M. sp. MCS

 

x

 

x

x

    

x

  

M. sp. MOTT36Y

 

x

 

x

 

x

x

     

M. sp. Spyr 1

 

x

 

x

x

       

M. thermoresistibile 19527

 

x

 

x

x

       

M. tuberculosis H37Rv

 

x

 

x

x

x

x

     

M. tusciae JS617a

 

x

 

x

x

xc

  

xx

x

  

M. ulcerans Agy99

 

x

 

x

  

x

     

M. vaccae ATCC 25954

 

x

x

x

x

       

M. vanbaalenii PYR-1

 

x

 

x

x

       

M. xenopi RIVM700367a

 

x

 

x

 

x

x

     

M. yongonense 05-1390

 

x

 

x

 

x

x

    

x

Nocardia brasiliensis ATCC700358

 

x

x

 

xc

       

Nocardia cyriacigeorgica GUH-2

 

x

x

 

xc

       

Nocardia farcinica IFM 10152

 

x

x

         

Rhodococcus equi 103S

 

x

          

Rhodococcus erythropolis PR4

 

x

          

Rhodococcus opacus B4

 

x

          

Staphylococcus aureus USA300

x

           

Streptomyces coelicolor A3 (2)

 

x

          

Saccharopolyspora erythraea NRRL 2338

 

xx

          

Stackebrandtia nassauensis DSM 44728

 

xxxx

          

Streptosporangium roseum DSM 43021

 

x

          

Segniliparus rotundus DSM 44985

  

x

x

        

Salinispora tropica CNB-440

 

xx

          

Tsukamurella paurometabola DSM 20162

  

x

 

xc

       
  1. aSequencing projects are incomplete (as of 07/2015)
  2. bRD1 deletion within cluster
  3. cAncestral region