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Table 1 Strain information

From: Identification of a Latin American-specific BabA adhesin variant through whole genome sequencing of Helicobacter pylori patient isolates from Nicaragua

Strain

Patient ID

Sitea

Platform

Age

Sex

Nic01_A

HEALF24875

A

MiSeq

48

M

Nic01_C

HEALF24875

C

MiSeq

Nic02_A

HEALF27688

A

MiSeq

66

F

Nic03_A

HEALF02414

A

MiSeq

29

F

Nic03_C

HEALF02414

C

HiScan

Nic04_A

HEALF29487

A

MiSeq

34

F

Nic04_C

HEALF29487

C

MiSeq

Nic05_A

HEALF24293

A

MiSeq

27

M

Nic05_C

HEALF24293

C

MiSeq

Nic06_A

HEALF14993

A

MiSeq

47

F

Nic06_A2

HEALF14993

A

MiSeq

Nic07_A

HEALF27875

A

MiSeq

27

M

Nic07_C

HEALF27875

C

MiSeq

Nic08_C2

HEALF25546

C

MiSeq

27

F

Nic08_C

HEALF25546

C

MiSeq

Nic09_A

HEALF19868

A

MiSeq

53

F

Nic09_C

HEALF19868

C

MiSeq

Nic10_A

HEALF06010

A

MiSeq

35

F

Nic10_C

HEALF06010

C

MiSeq

Nic11_A

HEALF19162

A

MiSeq

58

M

Nic11_C

HEALF19162

C

MiSeq

Nic12_A

HEALF08173

A

MiSeq

32

F

Nic12_C

HEALF08173

C

MiSeq

Nic13_A

HEALF23466

A

MiSeq

30

F

Nic13_C

HEALF23466

C

MiSeq

Nic14_A

HEALF16065

A

MiSeq

36

F

Nic14_C

HEALF16065

C

MiSeq

Nic15_A

HEALF12846

A

MiSeq

44

F

Nic15_C

HEALF12846

C

MiSeq

Nic16_A

HEALF00138

A

MiSeq

24

F

Nic16_C

HEALF00138

C

MiSeq

Nic17_A

HEALF01245

A

MiSeq

35

F

Nic17_C

HEALF01245

C

MiSeq

Nic18_A

HEALF08149

A

MiSeq

27

F

Nic18_C

HEALF08149

C

MiSeq

Nic19_A

HEALF23215

A

MiSeq

47

M

Nic19_C

HEALF23215

C

MiSeq

Nic20_A

HEALF19582

A

MiSeq

47

F

Nic20_C

HEALF19582

C

MiSeq

Nic21_A

HEALF02475

A

MiSeq

53

F

Nic21_C

HEALF02475

C

MiSeq

Pilot, only antrum strains:

Nic22_A

HEALF02021

A

HiScan

26

F

Nic23_A

HEALF12816

A

HiScan

55

F

Nic24_A

HEALF11221

A

HiScan

56

F

Nic25_A

HEALF04731

A

HiScan

58

M

Nic26_A

HEALF14646

A

HiScan

58

F

Nic27_A

HEALF23077

A

HiScan

40

F

Nic28_A

HEALF10585

A

HiScan

18

F

Nic29_A

HEALF19422

A

HiScan

60

F

Nic30_A

HEALF03699

A

HiScan

53

F

Nic31_A

HEALF15615

A

HiScan

30

F

Nic32_A

HEALF21906

A

HiScan

24

F

  1. Basic information about the patients from which strains were isolated together with sequencing platform and anatomical location of biopsy
  2. aSite of biopsy; A antrum, C corpus