|
Gene name
|
FDR
|
π
|
Tajima’s D
|
# TFBSs
|
Linkage with neighbor
|
|---|
|
CG33506
|
1.84E-03
|
0.0262
|
2.776
|
3
|
N
|
|
CG10463
|
9.300E-08
|
0.0179
|
2.603
|
2
|
N
|
|
CG6950
|
8.286E-03
|
0.0123
|
2.578
|
7
|
N
|
|
Nmda1
|
2.969E-04
|
0.00649
|
2.335
|
1
|
Y
|
|
CG14253
|
2.602E-02
|
0.0124
|
2.326
|
1
|
N
|
|
Cyp4d1
|
1.240E-09
|
0.0151
|
2.175
|
1
|
Y
|
|
brat
|
1.541E-02
|
0.00583
|
2.171
|
1
|
N
|
|
CG9044
|
9.963E-03
|
0.0171
|
2.094
|
1
|
N
|
|
CG15743
|
4.214E-02
|
0.00607
|
2.074
|
2
|
N
|
|
CG17660
|
1.586E-04
|
0.00255
|
−1.958
|
4
|
N
|
|
CG11590
|
2.735E-02
|
0.00648
|
−2.081
|
1
|
N
|
|
MBD-R2
|
1.061E-02
|
0.00387
|
−2.098
|
2
|
N
|
|
CHKov1
|
2.437E-09
|
0.00249
|
−2.106
|
3
|
Y
|
- Genes in which sequence variations in CPRs did not change TFBSs and different TFBSs did not affect differences in expression levels were excluded
-
FDR false discovery rates for the linear model used to detect the relationship between gene expression and sequence variations
- # TFBSs = the number of TFBSs estimated by PSSM scores, which differed among the alleles of CPRs found in the population
- Linkage with neighbor: linkage with one or more SNPs in noncoding regions flanking CPR could explain differences in expression level
