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Table 6 Parameter estimates and log-likelihood values under models of variable w ratios among sites for Esi0130_0068

From: Molecular evolution of candidate male reproductive genes in the brown algal model Ectocarpus

Model p Parameters l d N /d S Positively selected sites BEB (Pr > 90 %)
M0: one ratio 1 ω = 0.65860 –1812.54 None
M1a: nearly neutral 2 p0 = 0.45184, ω0 = 0.08242, p1 = 0.54816, ω1 = 1.00000 –1808.23 0.5854 Not allowed
M2a: positive selection 4 p0 = 0.93134, ω0 = 0.45793, p1 = 0.00000, ω1 = 1.00000, p2 = 0.06866, ω2 = 4.06616 –1804.93 0.7057 155
M3: discrete 5 p0 = 0.88395, ω0 = 0.45793, p1 = 0.04738, ω1 = 0.45796, p2 = 0.06866, ω2 = 4.06615 –1804.93 0.7057 155, 626, 821
M7: beta 2 p = 0.02684 q = 0.01590 –1808.29 0.6092 Not allowed
M8: beta& ω 4 p0 = 0.93179 p = 83.98499
q = 99.00000, (p1 = 0.06821)
ω = 4.07807
–1804.93 0.7058 155