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Table 3 Parameter estimates under pairwise sequence analysis in CODEML, PAML 4 using Ectocarpus siliculosus lineage 1a vs Ectocarpus sp. lineage 1c

From: Molecular evolution of candidate male reproductive genes in the brown algal model Ectocarpus

Gene Typea Alignment length (AA) ω = d N /d S d N d S κ
Esi0018_0186 GOI 513 0.154 0.016 0.107 5.66
Esi0026_0077 GOI 310 0.596 0.034 0.057 2.45
Esi0030_0082 GOI 975 0.435 0.041 0.094 4.33
Esi0033_0091 GOI 184 0.106 0.004 0.040 9.69
Esi0043_0064 GOI 679 0.387 0.029 0.074 2.89
Esi0101_0018 GOI 727 0.025 0.005 0.190 2.82
Esi0116_0079 GOI 375 0.049 0.006 0.123 7.02
Esi0130_0068 GOI 1349 0.529 0.022 0.042 2.09
Esi0132_0081 GOI 1464 0.577 0.048 0.083 2.64
Esi0146_0068 GOI 1537 0.705 0.041 0.058 2.86
Esi0180_0035 GOI 410 0.499 0.026 0.052 2.79
Esi0183_0054 GOI 428 0.338 0.024 0.071 2.76
Esi0186_0062 GOI 687 0.255 0.025 0.098 4.69
Esi0188_0041 GOI 429 0.137 0.011 0.081 2.34
Esi0660_0004 GOI 745 0.533 0.038 0.071 2.05
Esi0008_0135 HKG 533 0.214 0.021 0.098 2.565
Esi0010_0097 HKG 316 0.136 0.0099 0.0733 4.154
Esi0010_0133 HKG 363 0.157 0.0122 0.0777 3.494
Esi0021_0112 HKG 228 0.192 0.0125 0.065 1.986
Esi0044_0085 HKG 319 0.035 0.0037 0.1052 5.886
Esi0069_0059 HKG 609 0.108 0.0106 0.0981 3.173
Esi0116_0065 HKG 92 0 0 0.2612 2.829
Esi0138_0009 HKG 642 0.002 0.0006 0.3315 1.414
Esi0159_0021 HKG 375 0.079 0.0065 0.0814 5.385
Esi0197_0055 HKG 89 0.479 0.0231 0.0483 0.645
Esi0289_0026 HKG 372 0 0 0.0777 2.165
Esi0387_0021 HKG 435 0.016 0.0017 0.1097 1.215
  1. aGOI - gene of interest; HKG - housekeeping gene