Table 4 Evolutionary properties of the partitions used in the study
Partitions | r (A↔C) | r (A↔G) | r (A↔T) | r (C↔G) | r (C↔T) | r (G↔T) |
|---|---|---|---|---|---|---|
mtDNA 1&2 | 0.036 (0.015–0.059) | 0.186 (0.134–0.241) | 0.115 (0.089–0.141) | 0.065 (0.034–0.099) | 0.574 (0.503–0.642) | 0.021 (0.010–0.034) |
mtDNA 3 | 0.018 (0.006–0.029) | 0.378 (0.310–0.445) | 0.011 (0.00–0.014) | 0.020 (0.00–0.048) | 0.537 (0.464–0.608) | 0.032 (0.021–0.046) |
Wg 1&2 | 0.083 (0.021–0.149) | 0.142 (0.057–0.240) | 0.031 (0.000–0.079) | 0.026 (0.000–0.064) | 0.698 (0.565–0.827) | 0.018 (0.000–0.056) |
Wg 3 | 0.070 (0.042–0.100) | 0.364 (0.274–0.459) | 0.119 (0.072–0.171) | 0.041 (0.024–0.058) | 0.392 (0.300–0.484) | 0.012 (0.000–0.029) |
EF-1α 1&2 | 0.075 (0.–0.177) | 0.070 (0.000–0.167) | 0.040 (0–0.118) | 0.182 (0.037–0.351) | 0.197 (0.041–0.374) | 0.432 (0.216–0.646) |
EF-1α 3 | 0.052 (0.025–0.082) | 0.481 (0.373–0.588) | 0.072 (0.031–0.120) | 0.018 (0.004–0.035) | 0.342 (0.243–0.438) | 0.031 (0.008–0.059) |
Bub | 0.084 (0.051–0.121) | 0.289 (0.220–0.363) | 0.069 (0.048–0.091) | 0.036 (0.004–0.072) | 0.456 (0.377–0.538) | 0.062 (0.036–0.090) |
RpS4 | 0.068 (0.047–0.090) | 0.341 (0.296–0.388) | 0.104 (0.085–0.123) | 0.070 (0.042–0.099) | 0.332 (0.288–0.378) | 0.082 (0.062–0.104) |
RpL27a | 0.094 (0.070–0.119) | 0.302 (0.257–0.348) | 0.085 (0.070–0.101) | 0.094 (0.054–0.138) | 0.307 (0.260–0.353) | 0.115 (0.089–0.141) |
Partitions | pi A | pi C | pi G | pi T | α (Shape parameter) | m (Rtae multiplier) |
mtDNA 1&2 | 0.271 (0.242–0.299) | 0.137 (0.120–0.155) | 0.147 (0.124–0.171) | 0.443 (0.414–0.472) | 0.133 (0.118–0.148) | 0.580 (0.483–0.681) |
mtDNA 3 | 0.418 (0.392–0.444) | 0.049 (0.044–0.055) | 0.051 (0.045–0.057) | 0.480 (0.453–0.506) | 0.635 (0.549–0.729) | 8.929 (8.34–9.524) |
Wg 1&2 | 0.284 (0.234–0.333) | 0.215 (0.171–0.260) | 0.288 (0.237–0.339) | 0.211 (0.169–0.258) | 0.076 (0–0.181) | 0.034 (0.021–0.048) |
Wg 3 | 0.151 (0.119–0.182) | 0.402 (0.349–0.452) | 0.278 (0.231–0.327) | 0.168 (0.137–0.201) | 1.086 (0.776–1.415) | 1.254 (0.984–1.535) |
EF-1α 1&2 | 0.307 (0.260–0.354) | 0.212 (0.170–0.254) | 0.258 (0.213–0.305) | 0.222 (0.180–0.264) | 0.093 (0–0.258) | 0.029 (0.004–0.014) |
EF-1α 3 | 0.178 (0.135–0.223) | 0.373 (0.315–0.427) | 0.176 (0.132–0.222) | 0.270 (0.223–0.320) | 0.769 (0.508–1.038) | 0.336 (0.257–0.415) |
Bub | 0.351 (0.314–0.387) | 0.129 (0.105–0.153) | 0.169 (0.141–0.197) | 0.349 (0.313–0.385) | 0.222 (0.166–0.279) | 0.190 (0.152–0.229) |
RpS4 | 0.332 (0.308–0.354) | 0.162 (0.146–0.180) | 0.147 (0.131–0.163) | 0.357 (0.334–0.380) | 0.427 (0.364–0.496) | 0.262 (0.224–0.303) |
RpL27a | 0.390 (0.367–0.412) | 0.109 (0.096–0.123) | 0.111 (0.097–0.124) | 0.389 (0.366–0.410) | 0.820 (0.693–0.946) | 0.536 (0.455–0.619) |