Skip to main content
Fig. 7 | BMC Evolutionary Biology

Fig. 7

From: Saprophytic and pathogenic fungi in the Ceratocystidaceae differ in their ability to metabolize plant-derived sucrose

Fig. 7

Maximum likelihood phylogeny of the Fot5 DDD catalytic domain. This analysis was done using the WAG substitution model [49] and gamma correction to account for among site rate variation. The Ceratocystis Fot5 sequences are included in the grey area and indicated according to species (green dots = C. albifundus, blue dots = C. fimbriata, red dots = C. manginecans). The branch labelled with an asterisk received 81 % bootstrap support based on the analysis of 1000 pseudoreplicates (see Additional file 4: Figure S2 for full information regarding bootstrap support for the tree, as well as the sequence identifiers of putative Ceratocystis Fot5 homologs and Additional file 3: Table S2 for their genomic coordinates). GenBank accession numbers or for previously identified Fot5 homologs are: Fot2 [Genbank:JN624854, F. oxysporum), Fot5 [Genbank:CAE55867, F. oxysporum], Fot1 [Genbank:X64799, F. oxysporum], Fot4 [Genbank:AF076632, F. oxysporum], Fot9 [JGI:2517, F. graminearum], Fotyl [Genbank:CAG33729.1 Yarrowia lipolytica], Molly [Genbank:CAD32687, Parastagonospora nodorum], Ophio [Genbank:ABG26269, Ophiostoma novo-ulmi], PABRA [Genbank:ACY56713, Paracoccidioides brasiliensis], Pixie [Genbank:CAD32689, Parastagonospora nodorum], Pot2 [Genbank:CAA83918, Magnaporthe grisea], Pot3 [Genbank:AAC49418, M. grisea], SCSCL [Genbank:XP001592252, Sclerotinia sclerotiorum], Taf1 [Genbank:AAX83011, Aspergillus fumigatus], Tan1 [Genbank:U58946, Aspergillus awamori] USMA [Genbank:UM03882, Ustilago maydis), Flipper [Genbank:AAB63315, Botryotinia fuckeliana] and Cirt1 [Genbank:XP710204, Candida albicans]

Back to article page