Table 1 Strains used in this study
From: The evolutionary dynamics of tRNA-gene copy number and codon-use in E. coli.
Ref seq ID | Strains |
|---|---|
NC_000913 | Escherichia coli str. K-12 substr. MG1655 |
AC_000091 | Escherichia coli W3110 |
NC_002655 | Escherichia coli O157:H7 EDL933 |
NC_011353.1 | Escherichia coli O157:H7 EC4115 |
NC_013008.1 | Escherichia coli O157:H7 TW14359 |
NC_002695 | Escherichia coli O157:H7 Sakai |
NC_013941.1 | Escherichia coli O55:H7 CB9615 |
CP003109.1 | Escherichia coli O55:H7 str. RM12579 |
NC_007613 | Shigella boydii Sb227 |
NC_007384 | Shigella sonnei Ss046 |
NC_004337 | Shigella flexneri 2a str. 301 |
NC_004741 | Shigella flexneri 2a str. 2457T |
NC_008563 | Escherichia coli APEC O1 |
NC_007946 | Escherichia coli UTI89 |
NC_004431 | Escherichia coli CFT073 |
NC_008253.1 | Escherichia coli str. 536 |
NC_011740 | Escherichia fergusonii ATCC 35469 |
NC_011741 | Escherichia coli IAI1 |
NC_011742 | Escherichia coli S88 |
NC_011745 | Escherichia coli ED1a |
NC_011748 | Escherichia coli 55989 |
NC_011750 | Escherichia coli IAI39 |
NC_011751 | Escherichia coli UMN026 |
NC_007606.1 | Shigella dysenteriae sd 197 |