Table 1 Summary statistics of molecular loci used in this study
From: Divergence at the edges: peripatric isolation in the montane spiny throated reed frog complex
Summary statistics for each locus | ||||||||||||
Locus | Aligned BP | Variable sites | Parsimony-informative sites | Â | Â | Â | Â | Â | Â | Â | Â | Â |
ND2 | 1144 | 341 | 219 | Â | Â | Â | Â | Â | Â | Â | Â | Â |
Rag1 | 1275 | 72 | 30 | Â | Â | Â | Â | Â | Â | Â | Â | Â |
C-myc | 1378 | 71 | 47 | Â | Â | Â | Â | Â | Â | Â | Â | Â |
POMC | 625 | 52 | 32 | Â | Â | Â | Â | Â | Â | Â | Â | Â |
Combined nuclear loci | ||||||||||||
Species | Number of samples | Polymorphic sites | Nucleotide diversity | N.D. sd | Theta S | Theta S sd | Theta Pi | Theta Pi sd | Taj D | P Taj D | Fu FS | P FS |
H. burgessi | 21 | 77 | 0 | 0 | 20.29 | 7.09 | 13.73 | 7.17 | -1.37 | 0.06 | -10.76 | 0 |
H. tanneri | 3 | 25 | 0.01 | 0 | 14.67 | 9.12 | 16 | 12.37 | -12799658.42 | 0 | 1.63 | 0.52 |
H. minutissimus | 6 | 39 | 0 | 0 | 17.08 | 8.35 | 12.8 | 7.78 | -1.6 | 0 | 5.58 | 0.99 |
H. spinigularis | 8 | 40 | 0 | 0 | 13.11 | 5.98 | 10.86 | 6.3 | -1.7 | 0.02 | -0.3 | 0.35 |
H. ukwiva | 1 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA |
H. davenporti | 1 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA |
Mitochondrial | ||||||||||||
Species | Number of samples | Polymorphic sites | Nucleotide diversity | N.D. sd | Theta S | Theta S sd | Theta Pi | Theta Pi sd | Taj D | P Taj D | Fu FS | P FS |
H. burgessi | 21 | 27 | 0.01 | 0 | 7.23 | 2.74 | 5.42 | 3.04 | -1.06 | 0.16 | 0.36 | 0.6 |
H. tanneri | 3 | 7 | 0 | 0 | 4 | 2.73 | 4.67 | 3.9 | 0 | 0.79 | 0.31 | 0.37 |
H. minutissimus | 6 | 9 | 0 | 0 | 3.94 | 2.18 | 2.33 | 1.7 | -2.43 | 0 | -0.22 | 0.33 |
H. spinigularis | 8 | 13 | 0 | 0 | 4.63 | 2.32 | 3.61 | 2.33 | -1.38 | 0.09 | 0.1 | 0.5 |
H. ukwiva | 1 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA |
NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA |