TY - BOOK AU - Mayr, E. PY - 1963 DA - 1963// TI - Animal Species and Evolution PB - Harvard University Press CY - Cambridge, MA UR - https://doi.org/10.4159/harvard.9780674865327 DO - 10.4159/harvard.9780674865327 ID - Mayr1963 ER - TY - BOOK AU - Lomolino, M. V. AU - Riddle, B. R. AU - Whittaker, R. J. AU - Brown, J. H. PY - 2010 DA - 2010// TI - Biogeography PB - Sinauer Associates CY - Sunderland, MA ID - Lomolino2010 ER - TY - BOOK AU - Coyne, J. A. AU - Orr, H. A. PY - 2004 DA - 2004// TI - Speciation PB - Sunderland, MA CY - Sinauer Associates Sunderland, MA ID - Coyne2004 ER - TY - JOUR AU - Zink, R. M. PY - 2012 DA - 2012// TI - The Geography of Speciation: Case Studies from Birds JO - Evo Edu Outreach VL - 5 UR - https://doi.org/10.1007/s12052-012-0411-4 DO - 10.1007/s12052-012-0411-4 ID - Zink2012 ER - TY - JOUR AU - Hickerson, M. J. AU - Stahl, E. A. AU - Lessios, H. A. PY - 2006 DA - 2006// TI - Test for Simultaneous Divergence Using Approximate Bayesian Computation JO - Evolution VL - 60 UR - https://doi.org/10.1554/05-578.1 DO - 10.1554/05-578.1 ID - Hickerson2006 ER - TY - JOUR AU - Soltis, D. E. AU - Morris, A. B. AU - McLachlan, J. S. AU - Manos, P. S. AU - Soltis, P. S. PY - 2006 DA - 2006// TI - Comparative phylogeography of unglaciated eastern North America JO - Mol Ecol VL - 15 UR - https://doi.org/10.1111/j.1365-294X.2006.03061.x DO - 10.1111/j.1365-294X.2006.03061.x ID - Soltis2006 ER - TY - JOUR AU - Carstens, B. C. AU - Richards, C. L. PY - 2007 DA - 2007// TI - Integrating Coalescent and Ecological Niche Modeling in Comparative Phylogeography JO - Evolution VL - 61 UR - https://doi.org/10.1111/j.1558-5646.2007.00117.x DO - 10.1111/j.1558-5646.2007.00117.x ID - Carstens2007 ER - TY - JOUR AU - Victoriano, P. F. AU - Ortiz, J. C. AU - Benavides, E. AU - Adams, B. J. AU - Sites, J. W. PY - 2008 DA - 2008// TI - Comparative phylogeography of codistributed species of Chilean Liolaemus (Squamata: Tropiduridae) from the central-southern Andean range JO - Mol Ecol VL - 17 UR - https://doi.org/10.1111/j.1365-294X.2008.03741.x DO - 10.1111/j.1365-294X.2008.03741.x ID - Victoriano2008 ER - TY - JOUR AU - Hickerson, M. J. AU - Meyer, C. P. PY - 2008 DA - 2008// TI - Testing comparative phylogeographic models of marine vicariance and dispersal using a hierarchical Bayesian approach JO - BMC Evol Biol VL - 8 UR - https://doi.org/10.1186/1471-2148-8-322 DO - 10.1186/1471-2148-8-322 ID - Hickerson2008 ER - TY - JOUR AU - Kozak, K. H. AU - Graham, C. H. AU - Wiens, J. J. PY - 2008 DA - 2008// TI - Integrating GIS-based environmental data into evolutionary biology JO - Trends Ecol Evol VL - 23 UR - https://doi.org/10.1016/j.tree.2008.02.001 DO - 10.1016/j.tree.2008.02.001 ID - Kozak2008 ER - TY - JOUR AU - Knowles, L. L. PY - 2009 DA - 2009// TI - Statistical phylogeography JO - Annu Rev Ecol Evol Syst VL - 40 UR - https://doi.org/10.1146/annurev.ecolsys.38.091206.095702 DO - 10.1146/annurev.ecolsys.38.091206.095702 ID - Knowles2009 ER - TY - JOUR AU - Freckleton, R. P. AU - Jetz, W. PY - 2009 DA - 2009// TI - Space versus phylogeny: disentangling phylogenetic and spatial signals in comparative data JO - Proc R Soc B VL - 276 UR - https://doi.org/10.1098/rspb.2008.0905 DO - 10.1098/rspb.2008.0905 ID - Freckleton2009 ER - TY - JOUR AU - Pigot, A. L. AU - Phillimore, A. B. AU - Owens, I. P. F. AU - Orme, C. D. L. PY - 2010 DA - 2010// TI - The Shape and Temporal Dynamics of Phylogenetic Trees Arising from Geographic Speciation JO - Syst Biol VL - 59 UR - https://doi.org/10.1093/sysbio/syq058 DO - 10.1093/sysbio/syq058 ID - Pigot2010 ER - TY - JOUR AU - Losos, J. AU - Glor, R. PY - 2003 DA - 2003// TI - Phylogenetic comparative methods and the geography of speciation JO - Trends Ecol Evol VL - 18 UR - https://doi.org/10.1016/S0169-5347(03)00037-5 DO - 10.1016/S0169-5347(03)00037-5 ID - Losos2003 ER - TY - JOUR AU - Blair, C. AU - Heckman, K. L. AU - Russell, A. L. AU - Yoder, A. D. PY - 2014 DA - 2014// TI - Multilocus coalescent analyses reveal the demographic history and speciation patterns of mouse lemur sister species JO - BMC Evol Biol VL - 14 UR - https://doi.org/10.1186/1471-2148-14-57 DO - 10.1186/1471-2148-14-57 ID - Blair2014 ER - TY - JOUR AU - Peterson, A. T. AU - Soberón, J. AU - Sánchez-Cordero, V. PY - 1999 DA - 1999// TI - Conservatism of Ecological Niches in Evolutionary Time JO - Science VL - 285 UR - https://doi.org/10.1126/science.285.5431.1265 DO - 10.1126/science.285.5431.1265 ID - Peterson1999 ER - TY - BOOK AU - Schluter, D. PY - 2000 DA - 2000// TI - The Ecology of Adaptive Radiation PB - Oxford University Press CY - New York ID - Schluter2000 ER - TY - BOOK AU - Dieckmann, U. AU - Doebeli, M. AU - Metz, J. AU - Tautz, D. PY - 2004 DA - 2004// TI - Adaptive Speciation PB - Cambridge Univ. Press CY - Cambridge, UK UR - https://doi.org/10.1017/CBO9781139342179 DO - 10.1017/CBO9781139342179 ID - Dieckmann2004 ER - TY - CHAP AU - Kaneshiro, K. Y. ED - Kaneshiro, K. Y. ED - Giddings, L. ED - Anderson, W. PY - 1989 DA - 1989// TI - The dynamics of sexual selection and founder effects in speciation formation BT - Genetics, speciation, and the founder principle PB - Oxford University Press CY - Oxford, UK ID - Kaneshiro1989 ER - TY - JOUR AU - Panhuis, T. M. AU - Butlin, R. AU - Zuk, M. AU - Tregenza, T. PY - 2001 DA - 2001// TI - Sexual selection and speciation JO - Trends Ecol Evol VL - 16 UR - https://doi.org/10.1016/S0169-5347(01)02160-7 DO - 10.1016/S0169-5347(01)02160-7 ID - Panhuis2001 ER - TY - JOUR AU - Ödeen, A. AU - Florin, A. -. B. PY - 2002 DA - 2002// TI - Sexual selection and peripatric speciation: the Kaneshiro model revisited JO - J Evol Biol VL - 15 UR - https://doi.org/10.1046/j.1420-9101.2002.00378.x DO - 10.1046/j.1420-9101.2002.00378.x ID - Ödeen2002 ER - TY - JOUR AU - Carson, H. L. AU - Templeton, A. R. PY - 1984 DA - 1984// TI - Genetic Revolutions in Relation to Speciation Phenomena: The Founding of New Populations JO - Annu Rev Ecol Evol Syst VL - 15 UR - https://doi.org/10.1146/annurev.es.15.110184.000525 DO - 10.1146/annurev.es.15.110184.000525 ID - Carson1984 ER - TY - JOUR AU - Roy, M. S. PY - 1997 DA - 1997// TI - Recent diversification in African greenbuls (Pycnonotidae: Andropadus) supports a montane speciation model JO - Proc R Soc Lond B VL - 264 UR - https://doi.org/10.1098/rspb.1997.0185 DO - 10.1098/rspb.1997.0185 ID - Roy1997 ER - TY - JOUR AU - Linder, H. P. PY - 2003 DA - 2003// TI - The radiation of the Cape flora, southern Africa JO - Biol Rev VL - 78 UR - https://doi.org/10.1017/S1464793103006171 DO - 10.1017/S1464793103006171 ID - Linder2003 ER - TY - JOUR AU - Bowie, R. C. K. AU - Fjeldså, J. AU - Hackett, S. J. AU - Bates, J. M. AU - Crowe, T. M. PY - 2006 DA - 2006// TI - Coalescent models reveal the relative roles of ancestral polymorphism, vicariance, and dispersal in shaping phylogeographical structure of an African montane forest robin JO - Mol Phylo Evol VL - 38 UR - https://doi.org/10.1016/j.ympev.2005.06.001 DO - 10.1016/j.ympev.2005.06.001 ID - Bowie2006 ER - TY - JOUR AU - Lawson, L. P. PY - 2010 DA - 2010// TI - The discordance of diversification: evolution in the tropical-montane frogs of the Eastern Arc Mountains of Tanzania JO - Mol Ecol VL - 19 UR - https://doi.org/10.1111/j.1365-294X.2010.04788.x DO - 10.1111/j.1365-294X.2010.04788.x ID - Lawson2010 ER - TY - JOUR AU - Linder, H. P. AU - Klerk, H. M. AU - Born, J. AU - Burgess, N. D. AU - Fjeldså, J. AU - Rahbek, C. PY - 2012 DA - 2012// TI - The partitioning of Africa: statistically defined biogeographical regions in sub-Saharan Africa JO - J Biogeogr VL - 39 UR - https://doi.org/10.1111/j.1365-2699.2012.02728.x DO - 10.1111/j.1365-2699.2012.02728.x ID - Linder2012 ER - TY - JOUR AU - Demos, T. C. AU - Kerbis Peterhans, J. C. AU - Agwanda, B. AU - Hickerson, M. J. PY - 2014 DA - 2014// TI - Uncovering cryptic diversity and refugial persistence among small mammal lineages across the Eastern Afromontane biodiversity hotspot JO - Mol Phylo Evol VL - 71 UR - https://doi.org/10.1016/j.ympev.2013.10.014 DO - 10.1016/j.ympev.2013.10.014 ID - Demos2014 ER - TY - JOUR AU - Ceccarelli, F. S. AU - Menegon, M. AU - Tolley, K. A. AU - Tilbury, C. R. AU - Gower, D. J. AU - Laserna, M. H. AU - Kasahun, R. AU - Rodriguez-Prieto, A. AU - Hagmann, R. AU - Loader, S. P. PY - 2014 DA - 2014// TI - Evolutionary relationships, species delimitation and biogeography of Eastern Afromontane horned chameleons (Chamaeleonidae: Trioceros) JO - Mol Phylo Evol VL - 80 UR - https://doi.org/10.1016/j.ympev.2014.07.023 DO - 10.1016/j.ympev.2014.07.023 ID - Ceccarelli2014 ER - TY - JOUR AU - Poynton, J. C. AU - Loader, S. P. AU - Sherratt, E. AU - Clarke, B. T. PY - 2007 DA - 2007// TI - Amphibian Diversity in East African Biodiversity Hotspots: Altitudinal and latitudinal Patterns JO - Biodivers Conserv VL - 16 UR - https://doi.org/10.1007/s10531-006-9074-1 DO - 10.1007/s10531-006-9074-1 ID - Poynton2007 ER - TY - JOUR AU - Fjeldså, J. AU - Bowie, R. C. K. AU - Rahbek, C. PY - 2012 DA - 2012// TI - The Role of Mountain Ranges in the Diversification of Birds JO - Annu Rev Ecol Evol Syst VL - 43 UR - https://doi.org/10.1146/annurev-ecolsys-102710-145113 DO - 10.1146/annurev-ecolsys-102710-145113 ID - Fjeldså2012 ER - TY - JOUR AU - Hua, X. AU - Wiens, J. J. PY - 2010 DA - 2010// TI - Latitudinal Variation in Speciation Mechanisms in Frogs JO - Evolution VL - 64 UR - https://doi.org/10.1111/j.1558-5646.2009.00836.x DO - 10.1111/j.1558-5646.2009.00836.x ID - Hua2010 ER - TY - JOUR AU - Kozak, K. H. AU - Wiens, J. J. PY - 2007 DA - 2007// TI - Climatic zonation drives latitudinal variation in speciation mechanisms JO - Proc R Soc B VL - 274 UR - https://doi.org/10.1098/rspb.2007.1106 DO - 10.1098/rspb.2007.1106 ID - Kozak2007 ER - TY - CHAP AU - Lovett, J. C. PY - 1993 DA - 1993// TI - Eastern Arc moist forest flora BT - Biogeography and ecology of the rain forests of eastern Africa PB - Cambridge University Press CY - Cambridge, UK UR - https://doi.org/10.1017/CBO9780511895692.004 DO - 10.1017/CBO9780511895692.004 ID - Lovett1993 ER - TY - JOUR AU - De Menocal, P. B. PY - 1995 DA - 1995// TI - Plio-Pleistocene African Climate JO - Science VL - 270 UR - https://doi.org/10.1126/science.270.5233.53 DO - 10.1126/science.270.5233.53 ID - De Menocal1995 ER - TY - JOUR AU - Meadows, M. E. AU - Linder, H. P. PY - 1993 DA - 1993// TI - A Palaeoecological Perspective on the Origin of Afromontane Grasslands JO - J Biogeogr VL - 20 UR - https://doi.org/10.2307/2845584 DO - 10.2307/2845584 ID - Meadows1993 ER - TY - JOUR AU - Hamilton, A. C. PY - 1981 DA - 1981// TI - The quaternary history of African forests: its relevance to conservation JO - Afr J Ecol VL - 19 UR - https://doi.org/10.1111/j.1365-2028.1981.tb00647.x DO - 10.1111/j.1365-2028.1981.tb00647.x ID - Hamilton1981 ER - TY - CHAP AU - Lovett, J. C. AU - Marchant, R. AU - Taplin, J. AU - Küper, W. ED - Purvis, A. ED - Gittleman, J. L. ED - Brooks, T. M. PY - 2005 DA - 2005// TI - The oldest rainforests in Africa: stability or resilience for survival and diversity BT - Phylogeny and conservation PB - Cambridge University Press CY - Cambridge, UK ID - Lovett2005 ER - TY - JOUR AU - Marchant, R. AU - Mumbi, C. AU - Behera, S. AU - Yamagata, T. PY - 2007 DA - 2007// TI - The Indian Ocean dipole – the unsung driver of climatic variability in East Africa JO - Afr J Ecol VL - 45 UR - https://doi.org/10.1111/j.1365-2028.2006.00707.x DO - 10.1111/j.1365-2028.2006.00707.x ID - Marchant2007 ER - TY - JOUR AU - Mumbi, C. T. AU - Marchant, R. AU - Hooghiemstra, H. AU - Wooller, M. J. PY - 2008 DA - 2008// TI - Late Quaternary vegetation reconstruction from the Eastern Arc Mountains, Tanzania JO - Quat Res VL - 69 UR - https://doi.org/10.1016/j.yqres.2007.10.012 DO - 10.1016/j.yqres.2007.10.012 ID - Mumbi2008 ER - TY - JOUR AU - Loader, S. P. AU - Sara Ceccarelli, F. AU - Menegon, M. AU - Howell, K. M. AU - Kassahun, R. AU - Mengistu, A. A. AU - Saber, S. A. AU - Gebresenbet, F. AU - Sá, R. AU - Davenport, T. R. B. AU - Larson, J. G. AU - Müller, H. AU - Wilkinson, M. AU - Gower, D. J. PY - 2014 DA - 2014// TI - Persistence and stability of Eastern Afromontane forests: evidence from brevicipitid frogs JO - J Biogeogr VL - 41 UR - https://doi.org/10.1111/jbi.12331 DO - 10.1111/jbi.12331 ID - Loader2014 ER - TY - JOUR AU - Crisp, M. AU - Cook, L. AU - Steane, D. PY - 2004 DA - 2004// TI - Radiation of the Australian flora: what can comparisons of molecular phylogenies across multiple taxa tell us about the evolution of diversity in present–day communities? JO - Phil Trans R Soc Lond B VL - 359 UR - https://doi.org/10.1098/rstb.2004.1528 DO - 10.1098/rstb.2004.1528 ID - Crisp2004 ER - TY - JOUR AU - Cantalapiedra, J. L. AU - Hernández Fernández, M. AU - Morales, J. PY - 2011 DA - 2011// TI - Biomic Specialization and Speciation Rates in Ruminants (Cetartiodactyla, Mammalia): A Test of the Resource-Use Hypothesis at the Global Scale JO - PLoS One VL - 6 UR - https://doi.org/10.1371/journal.pone.0028749 DO - 10.1371/journal.pone.0028749 ID - Cantalapiedra2011 ER - TY - CHAP AU - Johnson, S. D. AU - Linder, H. P. ED - Allsopp, N. ED - Colville, J. F. ED - Verboom, G. A. PY - 2014 DA - 2014// TI - Speciation and extinction in the Greater Cape Floristic Region BT - Fynbos: Ecology, Evolution, and Conservation of a Megadiverse Region PB - Oxford University Press CY - Oxford, UK ID - Johnson2014 ER - TY - STD TI - Loader SP, Lawson LP, Portik DM, Menegon M. Three new species of spiny throated reed frogs (Anura: Hyperoliidae) from Evergreen forests of Tanzania. in press. BMC Res Notes. 8(1):167 ID - ref45 ER - TY - JOUR AU - Schiøtz, A. PY - 1982 DA - 1982// TI - Two New Hyperolius (Anura) from Tanzania JO - Steenstrupia VL - 8 ID - Schiøtz1982 ER - TY - BOOK AU - Schiøtz, A. PY - 1999 DA - 1999// TI - Treefrogs of Africa PB - Frankfurt am Main CY - Germany ID - Schiøtz1999 ER - TY - JOUR AU - Schiøtz, A. AU - Westergaard, M. M. PY - 2000 DA - 2000// TI - Notes on some Hyperolius (Anura: Hyperoliidae) from Tanzania, with supplementary information on two recently described species JO - Steenstrupia VL - 25 ID - Schiøtz2000 ER - TY - JOUR AU - Portik, D. M. AU - Mulungu, E. A. AU - Sequeira, D. AU - McEntee, J. P. PY - 2013 DA - 2013// TI - Herpetological surveys of the Serra Jeci and Namuli massifs, Mozambique, and an annotated checklist of the southern Afromontane archipelago JO - Herpetol Rev VL - 44 ID - Portik2013 ER - TY - JOUR AU - Cerling, T. E. AU - Bowman, J. R. AU - O’Neil, J. R. PY - 1988 DA - 1988// TI - An isotopic study of a fluvial-lacustrine sequence: The Plio-Pleistocene koobi fora sequence, East Africa JO - Palaeogeogr Palaeoclimatol Palaeoecol VL - 63 UR - https://doi.org/10.1016/0031-0182(88)90104-6 DO - 10.1016/0031-0182(88)90104-6 ID - Cerling1988 ER - TY - JOUR AU - Trauth, M. H. AU - Larrasoaña, J. C. AU - Mudelsee, M. PY - 2009 DA - 2009// TI - Trends, rhythms and events in Plio-Pleistocene African climate JO - Quat Sci Rev VL - 28 UR - https://doi.org/10.1016/j.quascirev.2008.11.003 DO - 10.1016/j.quascirev.2008.11.003 ID - Trauth2009 ER - TY - STD TI - IUCN SSC Amphibian Specialist Group 2013. Hyperolius spinigularis/Hyperolius minutissimus. The IUCN Red List of Threatened Species. Version 2014.3. Downloaded on 01 June 2015. UR - http://www.iucnredlist.org ID - ref52 ER - TY - JOUR AU - Rovero, F. AU - Menegon, M. AU - Fjeldså, J. AU - Collett, L. AU - Doggart, N. AU - Leonard, C. AU - Norton, G. AU - Owen, N. AU - Perkin, A. AU - Spitale, D. AU - Ahrends, A. AU - Burgess, N. D. PY - 2014 DA - 2014// TI - Targeted vertebrate surveys enhance the faunal importance and improve explanatory models within the Eastern Arc Mountains of Kenya and Tanzania JO - Diversity Distrib VL - 20 UR - https://doi.org/10.1111/ddi.12246 DO - 10.1111/ddi.12246 ID - Rovero2014 ER - TY - JOUR AU - Rovito, S. M. PY - 2010 DA - 2010// TI - Lineage divergence and speciation in the Web-toed Salamanders (Plethodontidae: Hydromantes) of the Sierra Nevada, California JO - Mol Ecol VL - 19 UR - https://doi.org/10.1111/j.1365-294X.2010.04825.x DO - 10.1111/j.1365-294X.2010.04825.x ID - Rovito2010 ER - TY - JOUR AU - Rovito, S. M. AU - Wake, D. B. AU - Papenfuss, T. J. AU - Parra-Olea, G. AU - Muñoz-Alonso, A. AU - Vásquez-Almazán, C. R. PY - 2012 DA - 2012// TI - Species formation and geographical range evolution in a genus of Central American cloud forest salamanders (Dendrotriton) JO - J Biogeogr VL - 39 UR - https://doi.org/10.1111/j.1365-2699.2012.02696.x DO - 10.1111/j.1365-2699.2012.02696.x ID - Rovito2012 ER - TY - JOUR AU - Smith, T. B. AU - Wayne, R. K. AU - Girman, D. J. AU - Bruford, M. W. PY - 1997 DA - 1997// TI - A Role for Ecotones in Generating Rainforest Biodiversity JO - Science VL - 276 UR - https://doi.org/10.1126/science.276.5320.1855 DO - 10.1126/science.276.5320.1855 ID - Smith1997 ER - TY - JOUR AU - Seutin, G. AU - White, B. N. AU - Boag, P. T. PY - 1991 DA - 1991// TI - Preservation of avian blood and tissue samples for DNA analyses JO - Can J Zool VL - 69 UR - https://doi.org/10.1139/z91-013 DO - 10.1139/z91-013 ID - Seutin1991 ER - TY - JOUR AU - Hoegg, S. AU - Vences, M. AU - Brinkmann, H. AU - Meyer, A. PY - 2004 DA - 2004// TI - Phylogeny and Comparative Substitution Rates of Frogs Inferred from Sequences of Three Nuclear Genes JO - Mol Biol Evol VL - 21 UR - https://doi.org/10.1093/molbev/msh081 DO - 10.1093/molbev/msh081 ID - Hoegg2004 ER - TY - JOUR AU - Wiens, J. J. AU - Fetzner, J. W. AU - Parkinson, C. L. AU - Reeder, T. W. PY - 2005 DA - 2005// TI - Hylid frog phylogeny and sampling strategies for speciose clades JO - Sys Biol. VL - 54 UR - https://doi.org/10.1080/10635150500234534 DO - 10.1080/10635150500234534 ID - Wiens2005 ER - TY - JOUR AU - Edgar, R. C. PY - 2004 DA - 2004// TI - MUSCLE: Multiple Sequence Alignment with High Accuracy and High Throughput JO - Nucl Acids Res VL - 32 UR - https://doi.org/10.1093/nar/gkh340 DO - 10.1093/nar/gkh340 ID - Edgar2004 ER - TY - JOUR AU - Crawford, A. J. PY - 2003 DA - 2003// TI - Relative Rates of Nucleotide Substitution in Frogs JO - J Mol Evol VL - 57 UR - https://doi.org/10.1007/s00239-003-2513-7 DO - 10.1007/s00239-003-2513-7 ID - Crawford2003 ER - TY - JOUR AU - Evans, B. J. AU - McGuire, J. A. AU - Brown, R. M. AU - Andayani, N. AU - Supriatna, J. PY - 2008 DA - 2008// TI - A coalescent framework for comparing alternative models of population structure with genetic data: evolution of Celebes toads JO - Biol Lett VL - 4 UR - https://doi.org/10.1098/rsbl.2008.0166 DO - 10.1098/rsbl.2008.0166 ID - Evans2008 ER - TY - BOOK AU - Pickersgill, M. PY - 2007 DA - 2007// TI - Frog Search, Results of Expeditions to Southern and Eastern Africa PB - Frankfurt am Main CY - Germany ID - Pickersgill2007 ER - TY - JOUR AU - Stamatakis, A. PY - 2006 DA - 2006// TI - RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models JO - Bioinformatics VL - 22 UR - https://doi.org/10.1093/bioinformatics/btl446 DO - 10.1093/bioinformatics/btl446 ID - Stamatakis2006 ER - TY - JOUR AU - Stamatakis, A. AU - Blagojevic, F. AU - Nikolopoulos, D. S. AU - Antonopoulos, C. D. PY - 2007 DA - 2007// TI - Exploring New Search Algorithms and Hardware for Phylogenetics: RAxML Meets the IBM Cell JO - J VLSI Sign Process Syst Sign Im VL - 48 UR - https://doi.org/10.1007/s11265-007-0067-4 DO - 10.1007/s11265-007-0067-4 ID - Stamatakis2007 ER - TY - JOUR AU - Drummond, A. J. AU - Rambaut, A. PY - 2007 DA - 2007// TI - BEAST: Bayesian evolutionary analysis by sampling trees JO - BMC Evol Biol VL - 7 UR - https://doi.org/10.1186/1471-2148-7-214 DO - 10.1186/1471-2148-7-214 ID - Drummond2007 ER - TY - JOUR AU - Heled, J. AU - Drummond, A. J. PY - 2010 DA - 2010// TI - Bayesian inference of species trees from multilocus data JO - Mol Biol Evol VL - 27 UR - https://doi.org/10.1093/molbev/msp274 DO - 10.1093/molbev/msp274 ID - Heled2010 ER - TY - JOUR AU - Shapiro, B. AU - Rambaut, A. AU - Drummond, A. J. PY - 2006 DA - 2006// TI - Choosing Appropriate Substitution Models for the Phylogenetic Analysis of Protein-Coding Sequences JO - Mol Biol Evol VL - 23 UR - https://doi.org/10.1093/molbev/msj021 DO - 10.1093/molbev/msj021 ID - Shapiro2006 ER - TY - JOUR AU - Rannala, B. AU - Yang, Z. PY - 2003 DA - 2003// TI - Bayes estimation of species divergence times and ancestral population sizes using DNA sequences from multiple loci JO - Genetics VL - 164 ID - Rannala2003 ER - TY - JOUR AU - Yang, Z. AU - Rannala, B. PY - 2010 DA - 2010// TI - Bayesian species delimitation using multilocus sequence data JO - PNAS VL - 107 UR - https://doi.org/10.1073/pnas.0913022107 DO - 10.1073/pnas.0913022107 ID - Yang2010 ER - TY - STD TI - Rambaut A, Drummond AJ. Tracer ver. 1.5. Program available at 2007; http://tree.bio.ed.ac.uk/software/tracer/. UR - http://tree.bio.ed.ac.uk/software/tracer/ ID - ref71 ER - TY - JOUR AU - Felsenstein, J. PY - 1985 DA - 1985// TI - Phylogenies and the comparative method JO - Am Nat VL - 125 UR - https://doi.org/10.1086/284325 DO - 10.1086/284325 ID - Felsenstein1985 ER - TY - JOUR AU - Yang, Z. PY - 2007 DA - 2007// TI - PAML 4: Phylogenetic Analysis by Maximum Likelihood JO - Mol Biol Evol VL - 24 UR - https://doi.org/10.1093/molbev/msm088 DO - 10.1093/molbev/msm088 ID - Yang2007 ER - TY - JOUR AU - Reid, N. M. AU - Carstens, B. C. PY - 2012 DA - 2012// TI - Phylogenetic estimation error can decrease the accuracy of species delimitation: a Bayesian implementation of the general mixed Yule-coalescent model JO - BMC Evol Biol VL - 12 UR - https://doi.org/10.1186/1471-2148-12-196 DO - 10.1186/1471-2148-12-196 ID - Reid2012 ER - TY - BOOK PY - 2011 DA - 2011// TI - R: A language and environment for statistical computing PB - R Foundation for Statistical Computing Vienna CY - Austria ID - ref75 ER - TY - JOUR AU - Grummer, J. A. AU - Bryson, R. W. AU - Reeder, T. W. PY - 2014 DA - 2014// TI - Species Delimitation Using Bayes Factors: Simulations and Application to the Sceloporus scalaris Species Group (Squamata: Phrynosomatidae) JO - Syst Biol VL - 63 UR - https://doi.org/10.1093/sysbio/syt069 DO - 10.1093/sysbio/syt069 ID - Grummer2014 ER - TY - JOUR AU - Moen, D. S. AU - Wiens, J. J. PY - 2009 DA - 2009// TI - Phylogenetic Evidence for Competitively Driven Divergence: Body-Size Evolution in Caribbean Treefrogs (hylidae: Osteopilus) JO - Evolution VL - 63 UR - https://doi.org/10.1111/j.1558-5646.2008.00538.x DO - 10.1111/j.1558-5646.2008.00538.x ID - Moen2009 ER - TY - BOOK AU - Wickham, H. PY - 2009 DA - 2009// TI - ggplot2: Elegant Graphics for Data Analysis PB - Springer CY - New York UR - https://doi.org/10.1007/978-0-387-98141-3 DO - 10.1007/978-0-387-98141-3 ID - Wickham2009 ER - TY - STD TI - Oksanen J, Blanchet FG, Kindt R, Legendre P, Minchin PR, O’Hara RB, Simpson GL, Solymos P, Stevens MHH, Wagner H. Vegan: Community Ecology Package. R Package Version 2.0-10. 2013. ID - ref79 ER - TY - JOUR AU - Hijmans, R. J. AU - Cameron, S. E. AU - Parra, J. L. AU - Jones, P. G. AU - Jarvis, A. PY - 2005 DA - 2005// TI - Very high resolution interpolated climate surfaces for global land areas JO - Int J Climatol VL - 25 UR - https://doi.org/10.1002/joc.1276 DO - 10.1002/joc.1276 ID - Hijmans2005 ER - TY - JOUR AU - Wiens, J. J. AU - Ackerly, D. D. AU - Allen, A. P. AU - Anacker, B. L. AU - Buckley, L. B. AU - Cornell, H. V. AU - Damschen, E. I. AU - Jonathan Davies, T. AU - Grytnes, J. -. A. AU - Harrison, S. P. AU - Hawkins, B. A. AU - Holt, R. D. AU - McCain, C. M. AU - Stephens, P. R. PY - 2010 DA - 2010// TI - Niche conservatism as an emerging principle in ecology and conservation biology JO - Ecol Lett VL - 13 UR - https://doi.org/10.1111/j.1461-0248.2010.01515.x DO - 10.1111/j.1461-0248.2010.01515.x ID - Wiens2010 ER - TY - JOUR AU - Martínez-Meyer, E. AU - Townsend Peterson, A. AU - Hargrove, W. W. PY - 2004 DA - 2004// TI - Ecological niches as stable distributional constraints on mammal species, with implications for Pleistocene extinctions and climate change projections for biodiversity JO - Global Ecol Biogeogr VL - 13 UR - https://doi.org/10.1111/j.1466-822X.2004.00107.x DO - 10.1111/j.1466-822X.2004.00107.x ID - Martínez-Meyer2004 ER -