TY - JOUR AU - Leu, J. AU - Yang, F. AU - Zhang, X. AU - Xu, X. AU - Kou, G. AU - Lo, C. PY - 2009 DA - 2009// TI - Whispovirus JO - Curr Top Microbiol Immunol VL - 328 ID - Leu2009 ER - TY - JOUR AU - Khadijah, S. AU - Neo, S. AU - Hossain, M. AU - Miller, L. AU - Mathavan, S. AU - Kwang, J. PY - 2003 DA - 2003// TI - Identification of white spot syndrome virus latency-related genes in specific-pathogen-free shrimps by use of a microarray JO - J Virol VL - 77 UR - https://doi.org/10.1128/JVI.77.18.10162-10167.2003 DO - 10.1128/JVI.77.18.10162-10167.2003 ID - Khadijah2003 ER - TY - JOUR AU - Lo, C. AU - Ho, C. AU - Peng, S. AU - Chen, C. AU - Hsu, H. AU - Chiu, Y. PY - 1996 DA - 1996// TI - White spot syndrome baculovirus (WSBV) detected in cultured and captured shrimp, crabs and other arthropods JO - Dis Aquat Organ VL - 27 UR - https://doi.org/10.3354/dao027215 DO - 10.3354/dao027215 ID - Lo1996 ER - TY - JOUR AU - Flegel, T. PY - 1997 DA - 1997// TI - Major viral diseases of the black tiger prawn (Penaeus monodon) in Thailand JO - World J Microbiol Biotechnol VL - 13 UR - https://doi.org/10.1023/A:1018580301578 DO - 10.1023/A:1018580301578 ID - Flegel1997 ER - TY - JOUR AU - Rajendran, K. AU - Vijayan, K. AU - Santiago, T. AU - Krol, R. PY - 1999 DA - 1999// TI - Experimental host range and histopathology of white spot syndrome virus (WSSV) infection in shrimp, prawns, crabs and lobsters from India JO - J Fish Dis VL - 22 UR - https://doi.org/10.1046/j.1365-2761.1999.00162.x DO - 10.1046/j.1365-2761.1999.00162.x ID - Rajendran1999 ER - TY - JOUR AU - Chen, L. AU - Lo, C. AU - Chiu, Y. AU - Chang, C. AU - Kou, G. PY - 2000 DA - 2000// TI - Natural and experimental infection of white spot syndrome virus (WSSV) in benthic larvae of mud crab Scylla serrata JO - Dis Aquat Organ VL - 40 UR - https://doi.org/10.3354/dao040157 DO - 10.3354/dao040157 ID - Chen2000 ER - TY - JOUR AU - Pradeep, B. AU - Rai, P. AU - Mohan, S. AU - Shekhar, M. AU - Karunasagar, I. PY - 2012 DA - 2012// TI - Biology, host range, pathogenesis and diagnosis of White spot syndrome virus JO - Indian J Virol VL - 23 UR - https://doi.org/10.1007/s13337-012-0079-y DO - 10.1007/s13337-012-0079-y ID - Pradeep2012 ER - TY - JOUR AU - Hulten, M. AU - Witteveldt, J. AU - Peters, S. AU - Kloosterboer, N. AU - Tarchini, R. AU - Fiers, M. PY - 2001 DA - 2001// TI - The white spot syndrome virus DNA genome sequence JO - Virology VL - 286 UR - https://doi.org/10.1006/viro.2001.1002 DO - 10.1006/viro.2001.1002 ID - Hulten2001 ER - TY - JOUR AU - Yang, F. AU - He, J. AU - Lin, X. AU - Li, Q. AU - Pan, D. AU - Zhang, X. PY - 2001 DA - 2001// TI - Complete genome sequence of the shrimp white spot bacilliform virus JO - J Virol VL - 75 UR - https://doi.org/10.1128/JVI.75.23.11811-11820.2001 DO - 10.1128/JVI.75.23.11811-11820.2001 ID - Yang2001 ER - TY - JOUR AU - Marks, H. AU - Goldbach, R. AU - Vlak, J. AU - Hulten, M. PY - 2004 DA - 2004// TI - Genetic variation among isolates of white spot syndrome virus JO - Arch Virol VL - 149 UR - https://doi.org/10.1007/s00705-003-0248-9 DO - 10.1007/s00705-003-0248-9 ID - Marks2004 ER - TY - BOOK AU - King, A. AU - Adams, M. AU - Carstens, E. AU - Lefkowitz, E. PY - 2012 DA - 2012// TI - Virus Taxonomy: Classification and Nomenclature of Viruses, 9th Report of the International Committee on Taxonomy of Viruses PB - Elsevier CY - USA ID - King2012 ER - TY - JOUR AU - Hulten, M. AU - Vlak, J. PY - 2001 DA - 2001// TI - Identification and phylogeny of a protein kinase gene of white spot syndrome virus JO - Virus Genes VL - 22 UR - https://doi.org/10.1023/A:1008127709325 DO - 10.1023/A:1008127709325 ID - Hulten2001 ER - TY - JOUR AU - Chen, L. -. L. AU - Wang, H. -. C. AU - Huang, C. -. J. AU - Peng, S. -. E. AU - Chen, Y. -. G. AU - Lin, S. -. J. PY - 2002 DA - 2002// TI - Transcriptional analysis of the DNA polymerase gene of shrimp white spot syndrome virus JO - Virology VL - 301 UR - https://doi.org/10.1006/viro.2002.1536 DO - 10.1006/viro.2002.1536 ID - Chen2002 ER - TY - JOUR AU - Marks, H. AU - Vorst, O. AU - Houwelingen, A. AU - Hulten, M. AU - Vlak, J. PY - 2005 DA - 2005// TI - Gene-expression profiling of White spot syndrome virus in vivo JO - J Gen Virol VL - 86 UR - https://doi.org/10.1099/vir.0.80895-0 DO - 10.1099/vir.0.80895-0 ID - Marks2005 ER - TY - JOUR AU - Schubart, C. AU - Diesel, R. AU - Hedges, S. PY - 1998 DA - 1998// TI - Rapid evolution to terrestrial life in Jamaican crabs JO - Nature VL - 393 UR - https://doi.org/10.1038/30724 DO - 10.1038/30724 ID - Schubart1998 ER - TY - STD TI - Diesel R, Schubart C, Duffy J, Thiel M: The social breeding system of the Jamaican bromeliad crab Metopaulias depressus. In: JE Duffy, M Thiel (eds) Evolutionary ecology of social and sexual systems: Crustaceans as model organisms. New York: Oxford University Press; 2007:365–386. ID - ref16 ER - TY - JOUR AU - Koyama, T. AU - Asakawa, S. AU - Katagiri, T. AU - Shimizu, A. AU - Fagutao, F. AU - Mavichak, R. PY - 2010 DA - 2010// TI - Hyper-expansion of large DNA segments in the genome of kuruma shrimp JO - Marsupenaeus japonicus BMC Genomics VL - 11 UR - https://doi.org/10.1186/1471-2164-11-141 DO - 10.1186/1471-2164-11-141 ID - Koyama2010 ER - TY - JOUR AU - Huang, S. AU - Lin, Y. AU - You, E. AU - Liu, T. AU - Shu, H. AU - Wu, K. PY - 2011 DA - 2011// TI - Fosmid library end sequencing reveals a rarely known genome structure of marine shrimp Penaeus monodon JO - BMC Genomics VL - 12 UR - https://doi.org/10.1186/1471-2164-12-242 DO - 10.1186/1471-2164-12-242 ID - Huang2011 ER - TY - JOUR AU - Leese, F. AU - Brand, P. AU - Rozenberg, A. AU - Mayer, C. AU - Agrawal, S. AU - Dambach, J. PY - 2012 DA - 2012// TI - Exploring Pandora’s box: potential and pitfalls of low coverage genome surveys for evolutionary biology JO - PLoS One VL - 7 UR - https://doi.org/10.1371/journal.pone.0049202 DO - 10.1371/journal.pone.0049202 ID - Leese2012 ER - TY - BOOK AU - Chevreux, B. PY - 2005 DA - 2005// TI - MIRA: an automated genome and EST assembler. PhD thesis, Ruprecht-Karls University PB - Ruprecht-Karls University CY - Heidelberg, Germany ID - Chevreux2005 ER - TY - JOUR AU - Altschul, S. AU - Madden, T. AU - Schaffer, A. AU - Zhang, J. AU - Zhang, Z. AU - Miller, W. PY - 1997 DA - 1997// TI - Gapped BLAST and PSI-BLAST: a new generation of protein database search programs JO - Nucl Acids Res VL - 25 UR - https://doi.org/10.1093/nar/25.17.3389 DO - 10.1093/nar/25.17.3389 ID - Altschul1997 ER - TY - JOUR AU - Kent, W. PY - 2002 DA - 2002// TI - BLAT—the BLAST-like alignment tool JO - Genome Res VL - 12 UR - https://doi.org/10.1101/gr.229202. Article published online before March 2002 DO - 10.1101/gr.229202. Article published online before March 2002 ID - Kent2002 ER - TY - JOUR AU - Langmead, B. AU - Salzberg, S. PY - 2012 DA - 2012// TI - Fast gapped-read alignment with Bowtie 2 JO - Nat Methods VL - 9 UR - https://doi.org/10.1038/nmeth.1923 DO - 10.1038/nmeth.1923 ID - Langmead2012 ER - TY - BOOK AU - Mayer, C. PY - 2010 DA - 2010// TI - Phobos Version 3.3.12. A tandem repeat search program ID - Mayer2010 ER - TY - JOUR AU - Rozen, S. AU - Skaletsky, H. PY - 2000 DA - 2000// TI - Primer3 on the WWW for general users and for biologist programmers JO - Methods Mol Biol VL - 132 ID - Rozen2000 ER - TY - JOUR AU - Ranwez, V. AU - Harispe, S. AU - Delsuc, F. AU - Douzery, E. PY - 2011 DA - 2011// TI - MACSE: Multiple Alignment of Coding SEquences accounting for frameshifts and stop codons JO - PLoS One VL - 6 UR - https://doi.org/10.1371/journal.pone.0022594 DO - 10.1371/journal.pone.0022594 ID - Ranwez2011 ER - TY - JOUR AU - Katoh, K. AU - Misawa, K. AU - Kuma, K. AU - Miyata, T. PY - 2002 DA - 2002// TI - MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform JO - Nucl Acids Res VL - 30 UR - https://doi.org/10.1093/nar/gkf436 DO - 10.1093/nar/gkf436 ID - Katoh2002 ER - TY - JOUR AU - Quevillon, E. AU - Silventoinen, V. AU - Pillai, S. AU - Harte, N. AU - Mulder, N. AU - Apweiler, R. PY - 2005 DA - 2005// TI - InterProScan: protein domains identifier JO - Nucl Acids Res VL - 33 UR - https://doi.org/10.1093/nar/gki442 DO - 10.1093/nar/gki442 ID - Quevillon2005 ER - TY - JOUR AU - Bao, Z. AU - Eddy, S. PY - 2002 DA - 2002// TI - Automated de novo identification of repeat sequence families in sequenced genomes JO - Genome Res VL - 12 UR - https://doi.org/10.1101/gr.88502 DO - 10.1101/gr.88502 ID - Bao2002 ER - TY - JOUR AU - Meyer, M. AU - Munzner, T. AU - Pfister, H. PY - 2009 DA - 2009// TI - MizBee: a multiscale synteny browser JO - IEEE Trans Vis Comput Graph VL - 15 UR - https://doi.org/10.1109/TVCG.2009.167 DO - 10.1109/TVCG.2009.167 ID - Meyer2009 ER - TY - JOUR AU - Sankoff, D. AU - Blanchette, M. PY - 1998 DA - 1998// TI - Multiple genome rearrangement and breakpoint phylogeny JO - J Comput Biol VL - 5 UR - https://doi.org/10.1089/cmb.1998.5.555 DO - 10.1089/cmb.1998.5.555 ID - Sankoff1998 ER - TY - JOUR AU - Stamatakis, A. PY - 2006 DA - 2006// TI - RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models JO - Bioinformatics VL - 22 UR - https://doi.org/10.1093/bioinformatics/btl446 DO - 10.1093/bioinformatics/btl446 ID - Stamatakis2006 ER - TY - JOUR AU - Gilles, A. AU - Meglécz, E. AU - Pech, N. AU - Ferreira, S. AU - Malausa, T. AU - Martin, J. PY - 2011 DA - 2011// TI - Accuracy and quality assessment of 454 GS-FLX Titanium pyrosequencing JO - BMC Genomics VL - 12 UR - https://doi.org/10.1186/1471-2164-12-245 DO - 10.1186/1471-2164-12-245 ID - Gilles2011 ER - TY - JOUR AU - Li, Q. AU - Yang, F. AU - Zhang, J. AU - Chen, Y. PY - 2003 DA - 2003// TI - Proteomic analysis of proteins that binds specifically to the homologous repeat regions of white spot syndrome virus JO - Biol Pharm Bull VL - 26 UR - https://doi.org/10.1248/bpb.26.1517 DO - 10.1248/bpb.26.1517 ID - Li2003 ER - TY - JOUR AU - Marks, H. AU - Ren, X. AU - Witteveldt, J. AU - Sandbrink, H. AU - Vlak, J. AU - Hulten, M. PY - 2005 DA - 2005// TI - Transcription regulation and genomics of White Spot Syndrome Virus JO - Dis Asian Aquac VL - 5 ID - Marks2005 ER - TY - JOUR AU - Zhu, Y. AU - Ding, Q. AU - Yang, F. PY - 2007 DA - 2007// TI - Characterization of a homologous-region-binding protein from white spot syndrome virus by phage display JO - Virus Res VL - 125 UR - https://doi.org/10.1016/j.virusres.2006.12.013 DO - 10.1016/j.virusres.2006.12.013 ID - Zhu2007 ER - TY - JOUR AU - Liu, X. AU - Yang, F. PY - 2005 DA - 2005// TI - Identification and function of a shrimp white spot syndrome virus (WSSV) gene that encodes a dUTPase JO - Virus Res VL - 110 UR - https://doi.org/10.1016/j.virusres.2005.01.003 DO - 10.1016/j.virusres.2005.01.003 ID - Liu2005 ER - TY - JOUR AU - Baldo, A. AU - McClure, M. PY - 1999 DA - 1999// TI - Evolution and horizontal transfer of dUTPase-encoding genes in viruses and their hosts JO - J Virol VL - 73 ID - Baldo1999 ER - TY - JOUR AU - Wang, Z. AU - Hu, L. AU - Yi, G. AU - Xu, H. AU - Qi, Y. AU - Yao, L. PY - 2004 DA - 2004// TI - ORF390 of white spot syndrome virus genome is identified as a novel anti-apoptosis gene JO - Biochem Biophys Res Commun VL - 325 UR - https://doi.org/10.1016/j.bbrc.2004.09.224 DO - 10.1016/j.bbrc.2004.09.224 ID - Wang2004 ER - TY - JOUR AU - Leu, J. AU - Chen, L. AU - Lin, Y. AU - Kou, G. AU - Lo, C. PY - 2010 DA - 2010// TI - Molecular mechanism of the interactions between white spot syndrome virus anti-apoptosis protein AAP-1 (WSSV449) and shrimp effector caspase JO - Dev Comp Immunol VL - 34 UR - https://doi.org/10.1016/j.dci.2010.05.010 DO - 10.1016/j.dci.2010.05.010 ID - Leu2010 ER - TY - JOUR AU - Leu, J. AU - Kuo, Y. AU - Kou, G. AU - Lo, C. PY - 2008 DA - 2008// TI - Molecular cloning and characterization of an inhibitor of apoptosis protein (IAP) from the tiger shrimp, Penaeus monodon JO - Dev Comp Immunol VL - 32 UR - https://doi.org/10.1016/j.dci.2007.05.005 DO - 10.1016/j.dci.2007.05.005 ID - Leu2008 ER - TY - JOUR AU - Eickbush, T. AU - Eickbush, D. PY - 2007 DA - 2007// TI - Finely orchestrated movements: evolution of the ribosomal RNA genes JO - Genetics VL - 175 UR - https://doi.org/10.1534/genetics.107.071399 DO - 10.1534/genetics.107.071399 ID - Eickbush2007 ER - TY - JOUR AU - Escobedo‐Bonilla, C. AU - Alday‐Sanz, V. AU - Wille, M. AU - Sorgeloos, P. AU - Pensaert, M. AU - Nauwynck, H. PY - 2008 DA - 2008// TI - A review on the morphology, molecular characterization, morphogenesis and pathogenesis of white spot syndrome virus JO - J Fish Dis VL - 31 UR - https://doi.org/10.1111/j.1365-2761.2007.00877.x DO - 10.1111/j.1365-2761.2007.00877.x ID - Escobedo‐Bonilla2008 ER - TY - JOUR AU - Katzourakis, A. AU - Gifford, R. PY - 2010 DA - 2010// TI - Endogenous viral elements in animal genomes JO - PLoS Genet VL - 6 UR - https://doi.org/10.1371/journal.pgen.1001191 DO - 10.1371/journal.pgen.1001191 ID - Katzourakis2010 ER - TY - JOUR AU - Patel, M. AU - Emerman, M. AU - Malik, H. PY - 2011 DA - 2011// TI - Paleovirology—ghosts and gifts of viruses past JO - Current Opinion in Virology VL - 1 UR - https://doi.org/10.1016/j.coviro.2011.06.007 DO - 10.1016/j.coviro.2011.06.007 ID - Patel2011 ER - TY - STD TI - Thézé J, Leclercq S, Moumen B, Cordaux R, Gilbert C: Remarkable diversity of endogenous viruses in a crustacean genome. Genome Biol Evol 2014;6:2129-2140 ID - ref46 ER - TY - STD TI - Witteveldt J, Vlak J: Virus-host interactions of white spot syndrome virus. In: Leung KY (ed) Current Trends in the Study of Bacterial and Viral Fish and Shrimp Diseases. Singapore: World Scientific Publishing; 2004:237–255. ID - ref47 ER - TY - JOUR AU - Ha, Y. AU - Soo-Jung, G. AU - Thi-Hoai, N. AU - Ra, C. AU - Kim, K. AU - Nam, Y. PY - 2008 DA - 2008// TI - Vaccination of shrimp (Penaeus chinensis) against white spot syndrome virus (WSSV) JO - J Microbiol Biotechnol VL - 18 ID - Ha2008 ER - TY - JOUR AU - Chaivisuthangkura, P. AU - Longyant, S. AU - Rukpratanporn, S. AU - Srisuk, C. AU - Sridulyakul, P. AU - Sithigorngul, P. PY - 2010 DA - 2010// TI - Enhanced white spot syndrome virus (WSSV) detection sensitivity using monoclonal antibody specific to heterologously expressed VP19 envelope protein JO - Aquaculture VL - 299 UR - https://doi.org/10.1016/j.aquaculture.2009.12.005 DO - 10.1016/j.aquaculture.2009.12.005 ID - Chaivisuthangkura2010 ER - TY - JOUR AU - Pathan, M. AU - Gireesh-Babu, P. AU - Pavan-Kumar, A. AU - Jeena, K. AU - Sharma, R. AU - Makesh, M. PY - 2013 DA - 2013// TI - In vivo therapeutic efficacy of recombinant Penaeus monodon antiviral protein (rPmAV) administered in three different forms to WSSV infected Penaeus monodon JO - Aquaculture VL - 376–379 UR - https://doi.org/10.1016/j.aquaculture.2012.10.034 DO - 10.1016/j.aquaculture.2012.10.034 ID - Pathan2013 ER - TY - JOUR AU - Liu, W. AU - Yu, H. AU - Peng, S. AU - Chang, Y. AU - Pien, H. AU - Lin, C. PY - 2001 DA - 2001// TI - Cloning, characterization, and phylogenetic analysis of a shrimp white spot syndrome virus gene that encodes a protein kinase JO - Virology VL - 289 UR - https://doi.org/10.1006/viro.2001.1091 DO - 10.1006/viro.2001.1091 ID - Liu2001 ER - TY - JOUR AU - Wynant, N. AU - Santos, D. AU - Verdonck, R. AU - Spit, J. AU - Van, W. AU - Broeck, J. PY - 2014 DA - 2014// TI - Identification, functional characterization and phylogenetic analysis of double stranded RNA degrading enzymes present in the gut of the desert locust, Schistocerca gregaria JO - Insect Biochem Mol Biol VL - 46 UR - https://doi.org/10.1016/j.ibmb.2013.12.008 DO - 10.1016/j.ibmb.2013.12.008 ID - Wynant2014 ER -