|
Model
|
λ
Background
x 10
3
|
λ
Sternorrhyncha
x 10
3
|
μ
Background
x 10
3
|
μ
Sternorrhyncha
x 10
3
|
-ML
|
# Parameters
|
Likelihood ratio
|
p
-value
|
---|
APC | Single λ | 1.2177 | - | - | - | 34.31 | 1 | 0.06 | 0.843 |
| Single λ + μ | 1.2533 | - | 1.0615 | - | 34.28 | 2 | | |
AAAP | Multiple λ | 0.3631 | 6.849 | - | - | 35.01 | 2 | 12.51 | 0.002 |
| Multiple λ + μ | 2.88 x 10-9
| 1.110 | 0.6341 | 6.03 x 10-3
| 28.76 | 4 | | |
- For APC, the estimated parameters are global across the phylogeny. For AAAP, the parameters were rates were allowed to shift in sternorrhynchan species. Data generated with CAFE. λ represents the probability of gene duplication/loss (Single/Multiple λ), or gene duplication only (Single/Multiple λ + μ) per gene per million years. μ represents the probability of gene loss per gene per million years.