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Table 2 Genes representing a translocation from 6BS to 7DL

From: Putative interchromosomal rearrangements in the hexaploid wheat (Triticum aestivum L.) genotype ‘Chinese Spring’ revealed by gene locations on homoeologous chromosomes

Gene name

Locations*

Details of the best 3 hits

Best 3 hits

Additional hits

Contig_ID

Linkage (cM)

Contig_ID

Linkage (cM)

Contig_ID

Linkage# (cM)

Bradi1g35550.1

6AS_4384393

NA

6DS_2091402

81.58

7DL_3388333

NA

6AS,6DS,7DL

 

Bradi3g06916.1

6AS_3107342

NA

6DS_2095270

81.58

7DL_3331018

111.08

6AS,6DS,7DL

 

Bradi1g35592.1

6AS_4428500

60.96

6DS_2122226

81.58

7DL_3332022

NA

6AS,6DS,7DL

2DL,5DL

Bradi3g05560.1

6AS_4392917

60.96

6DS_2080416

81.58

7DL_3328281

142.97

6AS,6DS,7DL

1BS,3DL,4AL,7DS

Bradi3g05810.1

6AS_4403468

60.96

6DS_2098202

81.58

7DL_3393819

152.76

6AS,6DS,7DL

4AL,4DS,7AL

Bradi3g05960.1

6AS_4357746

60.96

6DS_2125465

81.58

7DL_3358080

160.68

6AS,6DS,7DL

5BL,5DL,7AL

Bradi3g07970.1

6AS_4351841

60.96

6DS_2058543

81.58

7DL_3349115

111.08

6AS,6DS,7DL

4AL,4BS,4DS,5BL,7BL

TRIUR3_05619

6AS_4354230

60.96

6DS_2082494

81.58

7DL_3392566

191.24

6AS,6DS,7DL

1AL,1BL,1DL,7DS

TRIUR3_15544

6AS_4357746

60.96

6DS_2125465

81.58

7DL_3358080

160.68

6AS,6DS,7DL

5BL,5DL,7AL

AEGTA43678

6AS_4359749

NA

6DS_2056711

81.58

7DL_3390442

NA

6AS,6DS,7DL

6DL,7DS

AEGTA43755

6AS_4365865

NA

6DS_2086887

81.58

7DL_3342428

120.28

6AS,6DS,7DL

3B,4AS,4DL,7BS,7DS

Bradi3g06670.1

6AS_4384393

NA

6DS_2091402

81.58

7DL_3388333

NA

6AS,6DS,7DL

5BL,5BS,5DL,5DS,6AL,6DL,7BS

Bradi3g16020.1

6AS_148467

NA

6DS_2077560

81.58

7DL_3361916

NA

6AS,6DS,7DL

4DL,5AL,5BL,7AL

Contig36859

6AS_4324849

NA

6DS_1084274

81.58

7DL_3331672

NA

6AS,6DS,7DL

1AL,1BL,2AL,2BL,5BL,5DL,6AL

Contig99362

6AS_148467

NA

6DS_2077560

81.58

7DL_3361916

NA

6AS,6DS,7DL

4DL,5AL,5BL,5DL

TRIUR3_17134

6AS_3958480

NA

6DS_2065488

81.58

7DL_3396087

160.28

6AS,6DS,7DL

1AL,1AS,1BS,2AL,2AS,7BL

  1. *4AS and 4AL refer to the short and long arms, respectively, of the modern chromosome 4A.
  2. *NA indicates map locations not available.