Skip to main content

Table 1 Key features of gadiform T-P spacers

From: An evolutionary preserved intergenic spacer in gadiform mitogenomes generates a long noncoding RNA

Species

Common name

1Size (bp)

2Box

3Reference

Order: Gadiformes

    

Family: Gadidae

    

Gadus morhua

(Atlantic cod)

74/103

2/3

AM489716; [22],[23]

Gadus ogac

(Greenland cod)

73/102

2/3

FJ396453; [24]

Theragra chalcogramma

(Alaska Pollock)

70-72

2

Y17984; [22]

Theragra finnmarchica

(Norwegian Pollock)

72

2

AM489718

Boreogadus saida

(Polar cod)

70

2

Y17985; [22]

Arctogadus glacialis

(Arctic cod)

*291

2

[24]

Melanogrammus aeglefinus

(Haddock)

99

2

Y17986; [22]

Merlangius merlangius

(Whiting)

69

2

DQ020496

Pollachius virens

(Saithe)

59

1

FR751399

Pollachius pollachius

(Pollack)

50

1

FR751400

Trisopterus esmarkii

(Norwegian pout)

77

1

This work

Trisopterus minutes

(Poor cod)

75

1

This work

Micromesistius poutassou

(Blue whiting)

48

1

FR751401; [22]

Gadiculus argenteus

(Silvery pout)

*261-263

3

This work

Family: Lotidae

    

Lota lota

(Burbot)

103

1

AP004412

Brosme brosme

(Tusk)

48

1

Y17988; [22]

Molva molva

(Ling)

83

1

This work

Molva dipterygia

(Blue ling)

59

1

This work

Family: Phycidae

    

Enchelyopus cimbrius

(Fourbeaed rockling)

25

1

Y17989; [22]

Gaidropsarus argentatus

(Tree-bearded rockling)

48

1

Y17990; [22]

Phycis blennoides

(Greater forkbeard)

28

1

This work

Family: Ranicipitidae

    

Raniceps raninus

(Tadpole fish)

39

1

This work

Family: Merlucciidae

    

Macruronus novaezelandiae

(Hoki)

59

1

This work

Merluccius merluccius

(European hake)

*223-532

2

FR751402; This work

Family: Macrouridae

    

Squalogadus modificatus

(Tadpole whiptail)

47

1

AP008989

Trachyrincus murragi

(Roughnose grenadier)

64

1

AP008990

Bathygadus antrodes

(Anadara)

7

-

AP008988

Caelorinchus kishinouyei

(Mugara grenadier)

12

-

AP002929

Coryphaenoides rupestris

(Roundnose grenadier)

21

-

This work

Ventrifossa garmani

(Sagami grenadier)

72

-

AP008991

Family: Bregmacerotidae

    

Bregmaceros nectabanus

(Smallscale codlet)

(+)

-

AP004411

Family: Moridae

    

Physiculus japonicus

(Japanese codling)

16

-

AP004409

Laemonema longipes

(Longfin codling)

33

-

AB108839

Order: Lophiiformes

    

Family: Lophiidae

    

Lophius piscatorius

(Frogfish)

0

-

This work

Lophius americanus

(American angler)

0

-

AP00414

  1. Notes: 1Sequence and size variants of T-P spacers are given in Additional file 6: Figure S5. T-P spacers of M. merluccius, G. argenteus, and A. glacialis are heteroplasmic (*). The T-P spacer of B. nectabanus (+) is involved in gene order rearrangements. 2Box-motif copy number. 3Data base accession number and key references.