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Table 1 KH tests verify the significance of breakpoints estimated by GARD analysis

From: Differential stepwise evolution of SARS coronavirus functional proteins in different host species

     p-value
Dataset Number of breakpoints AICc improvement Breakpoint location LHS RHS
Spike 9 588.485 776 1.000 0.220
    933 0.059 0.427
    1257 1.000 0.464
    1485 1.000 1.000
    2067 1.000 0.670
    2301 0.002 0.002
    2592 0.893 0.061
    2916 0.085 0.988
    3501 1.000 0.659
Replicase 2 30.414 1230 1.000 0.507
    4398 1.000 0.040
3'-end ORFs 5 254.203 454 0.363 0.306
    729 0.210 0.001
    1091 0.010 0.078
    1927 0.254 0.005
    3321 1.000 0.353
  1. KH test was used in both directions to compare phylogenies constructed from the alignment segment to the left hand side (LHS) and right hand side (RHS) of each estimated breakpoint. All p-values have been adjusted by Bonferroni correction.