S. lewini haplotypes (381 bases, '-' is an indel) Total N = 47 | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Haplotype | 3 | 7 | 8 | 9 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 2 | 2 | 2 | 3 | 3 | Indonesia (n = 28) | East Australia (n = 15) | West Australia (n = 4) |
 | 0 | 6 | 3 | 5 | 1 | 1 | 2 | 2 | 2 | 3 | 3 | 4 | 6 | 5 | 8 | 8 | 9 | 9 | 5 | 5 |  |  |  |
 |  |  |  |  | 5 | 7 | 0 | 1 | 3 | 8 | 9 | 7 | 8 | 1 | 1 | 3 | 8 | 9 | 1 | 2 |  |  |  |
   SL01 | A | A | C | A | T | G | T | C | C | T | C | A | T | A | T | A | T | A | T | A | 0.214 | 0.267 | - |
   SL02 | . | . | . | . | . | . | . | . | . | . | . | . | C | . | . | . | . | . | . | . | 0.464 | 0.600 | 0.750 |
   SL03 | . | . | . | . | . | A | . | . | T | C | . | . | . | G | C | G | C | G | C | G | 0.143 | - | 0.250 |
   SL04 | . | . | T | . | . | . | . | . | . | . | . | . | C | . | . | . | . | . | . | . | 0.036 | - | - |
   SL05 | . | . | . | . | . | . | . | . | . | . | . | . | . | G | . | . | . | . | . | . | 0.036 | 0.133 | - |
   SL06 | . | . | . | . | . | . | . | . | . | . | . | T | C | . | . | . | . | . | . | . | 0.036 | - | - |
   SL07 | . | . | . | . | . | A | . | . | T | C | . | . | . | . | C | G | C | G | C | G | 0.036 | - | - |
   SL08 | . | . | . | . | . | . | . | T | . | . | . | T | C | . | . | . | . | . | . | . | 0.036 | - | - |
   SL09 | T | T | . | G | C | - | A | . | . | C | T | . | C | . | C | G | . | . | . | . | - | - | - |
Number of haplotypes | 8 | 3 | 2 | ||||||||||||||||||||
Number of polymorphic sites | 15 | 2 | Â | ||||||||||||||||||||
Nucleotide diversity per site (within population, %) | 1.112 ± 0.635 | 0.204 ± 0.176 | 1.631 ± 0.117 | ||||||||||||||||||||
Haplotype diversity per location (within population) | 0.738 ± 0.068 | 0.590 ± 0.106 | 0.500 ± 0.265 |