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Table 10 Control region mtDNA haplotypes (with numbered polymorphic sites), haplotype frequencies, shared haplotypes and indices of population diversity for Sphyrna lewini.

From: The extent of population genetic subdivision differs among four co-distributed shark species in the Indo-Australian archipelago

S. lewini haplotypes (381 bases, '-' is an indel) Total N = 47

Haplotype

3

7

8

9

1

1

1

1

1

1

1

1

1

2

2

2

2

2

3

3

Indonesia

(n = 28)

East Australia

(n = 15)

West Australia

(n = 4)

 

0

6

3

5

1

1

2

2

2

3

3

4

6

5

8

8

9

9

5

5

   
     

5

7

0

1

3

8

9

7

8

1

1

3

8

9

1

2

   

   SL01

A

A

C

A

T

G

T

C

C

T

C

A

T

A

T

A

T

A

T

A

0.214

0.267

-

   SL02

.

.

.

.

.

.

.

.

.

.

.

.

C

.

.

.

.

.

.

.

0.464

0.600

0.750

   SL03

.

.

.

.

.

A

.

.

T

C

.

.

.

G

C

G

C

G

C

G

0.143

-

0.250

   SL04

.

.

T

.

.

.

.

.

.

.

.

.

C

.

.

.

.

.

.

.

0.036

-

-

   SL05

.

.

.

.

.

.

.

.

.

.

.

.

.

G

.

.

.

.

.

.

0.036

0.133

-

   SL06

.

.

.

.

.

.

.

.

.

.

.

T

C

.

.

.

.

.

.

.

0.036

-

-

   SL07

.

.

.

.

.

A

.

.

T

C

.

.

.

.

C

G

C

G

C

G

0.036

-

-

   SL08

.

.

.

.

.

.

.

T

.

.

.

T

C

.

.

.

.

.

.

.

0.036

-

-

   SL09

T

T

.

G

C

-

A

.

.

C

T

.

C

.

C

G

.

.

.

.

-

-

-

Number of haplotypes

8

3

2

Number of polymorphic sites

15

2

 

Nucleotide diversity per site (within population, %)

1.112 ± 0.635

0.204 ± 0.176

1.631 ± 0.117

Haplotype diversity per location (within population)

0.738 ± 0.068

0.590 ± 0.106

0.500 ± 0.265

  1. Key: Haplotype SL01 has Genbank accession number FJ161690. Haplotype SL09 represents an individual collected from the North Atlantic and has sequence that is equivalent to Duncan et al [15] haplotype number 16.