Skip to main content

Table 4 Specimens used in the phylogenetic analyses of cytochrome b, corresponding GenBank Accession Numbers, locality, geographical coordinates and reference data.

From: The taxonomic status of the endangered thin-spined porcupine, Chaetomys subspinosus(Olfers, 1818), based on molecular and karyologic data

Taxon GenBank Accession Number Locality Lat. Long. Reference
Ctenodactylidae      
Ctenodactylus vali AJ389532 --    [22]
Massoutiera mzabi AJ389533 --    [22]
Bathyergidae      
Bathyergus janetta AF012241 De Riet, SAF -30.1 17.4 [85]
Cryptomys damarensis U87526 Okavango Delta, BOT -19.5 23.2 [86]
Hystricidae      
Hystrix africaeaustralis X70674 --    [19]
Erethizontidae      
Chaetomys subspinosus EU544660 Salvador, BA -13.0 -38.5 this study
Coendou bicolour U34852 Eirunepé, Rio Juruá, AM -6.6 -60.9 [20]
Coendou prehensilis AF411581 UHE Manso, MT -15.5 -55.8 [7]
Ertehizon dorsatum FJ357428 --    this study
Sphiggurus villosus EU544661 UHE Rosal, ES -20.9 -41.7 this study
Sphiggurus villosus EU544662 Biritiba Mirim, SP -23.6 -46.0 this study
Sphiggurus villosus AF411580 Sumidouro, RJ -22.1 -42.7 [7]
Echimyidae      
Euryzygomatomys spinosus EU544667 Biritiba Mirim, SP -23.6 -46.0 this study
Isothrix bistriata L23355 Upper Rio Urucu, AM -4.9 -65.3 [87]
Kannabateomys amblyonyx EU544665 Biritiba Mirim, SP -23.6 -46.0 this study
Myocastor coypus EU544663 Biritiba Mirim, SP -23.6 -46.0 this study
Proechimys roberti EU544666 Vila Rica, MT -9.9 -51.2 this study
Thrichomys apereoides EU544668 Januária, MG -15.5 -44.4 this study
Trinomys iheringi EU544664 Boracéia, SP -22.2 -48.8 this study
Octodontidae      
Octodontomys gliroides AF370706 Tilcara, Jujuy, ARG -23.6 -65.4 [88]
Spalacopus cyanus AF007061 --    [89]
Tympanoctomys barrerae AF007060 --    [89]
Ctenomyidae      
Ctenomys frater AF007045 Tarija, BOL -21.5 -64.7 [89]
Ctenomys haigi AF422920 Perito Moreno, ARG -41.1 -71.0 [53]
Caviidae      
Cavia aperea EU544669 Biritiba Mirim, SP -23.6 -46.0 this study
Dolichotis patagonum AY382787 Santa Cruz, ARG -50.0 -68.5 [84]
Dasyproctidae      
Myoprocta pratti U34850 Altamira, Rio Juruá, AM -6.6 -68.9 [20]
  1. Countries: ARG, Argentina; BOL, Bolivia; BOT, Botswana; PAR, Paraguay; PER, Peru; SAF, South Africa; VEN, Venezuela. States in Brazil: AC, Acre; AM, Amazonas; BA, Bahia; ES, Espírito Santo; MG, Minas Gerais; MT, Mato Grosso; RJ, Rio de Janeiro; SP, São Paulo.