Genome wide evolutionary analyses reveal serotype specific patterns of positive selection in selected Salmonella serotypes

Table 3 Genes that show evidence of recombination in all four tests^a

Gene annotation no. for S. Typhimurium LT2	Protein name	Gene name	JCVI Role Category
STM0067	Carbamoyl-phosphate synthase, large subunit	carB	Purines, pyrimidines, nucleosides, and nucleotides
STM0224	Surface antigen	b0177	Unknown function
STM0540	Conserved hypothetical protein	-	Hypothetical proteins
STM0661	Inosine-uridine preferring nucleoside hydrolase	iunH	Purines, pyrimidines, nucleosides, and nucleotides
STM2287	Conserved hypothetical protein	-	Hypothetical proteins
STM2660	ATP-dependent protease, Hsp 100, part of novel	clpB-1	Protein fate
STM2947	Sulfite reductase (nADPh) hemoprotein beta-component	-	Central intermediary metabolism
STM2948	Sulfite reductase (nADPh) flavoprotein alpha-component	-	Central intermediary metabolism
STM3174	DNA topoisomerase IV, A subunit	parC	DNA metabolism
STM4066	Fructokinase	cscK	Energy metabolism

^aThese genes showed evidence for recombination (Q < 0.1) in four tests (i.e., GENECONV, Maximum χ² [Max-χ²], pairwise homoplasy index [PHI], and neighbor similarity score [NSS])

ISSN: 2730-7182