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Table 3 Average protein similarity between rooA elements

From: Evolutionary dynamics of the LTR retrotransposons roo and rooA inferred from twelve complete Drosophila genomes

  Dyak Dere Dmoj
Dyak 98.1 87.6 42
Dere   93.8 63.1
Dmoj    100
  1. The 11 rooA elements with a coding sequence length longer than 1180 aa were used to estimate the amino acid similarity in percent for every pair of these elements using protdist from the PHYLIP package [51]. Dyak: D. yakuba; Dere: D. erecta; Dmoj: D. mojavensis