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Table 2 Average protein similarity between roo elements

From: Evolutionary dynamics of the LTR retrotransposons roo and rooA inferred from twelve complete Drosophila genomes

  Dsec Dmel Dyak Dana Dwil Dmoj
Dsec 99.1 98 91.9 62.5 61 61.8
Dmel   99 91.8 61.9 59 61.3
Dyak    100 62.3 60.6 63.2
Dana     94.1 49.7 54.4
Dwil      93.1 53.9
Dmoj       89.8
  1. The 123 roo elements with a coding sequence length longer than 1180 aa were used to estimate the amino acid similarity in percent for every pair of these elements using protdist from the PHYLIP package [51]. Dsec: D. sechellia; Dmel: D. melanogaster; Dyak: D. yakuba; Dana: D. ananassae; Dwil: D. willistoni; Dmoj: D. mojavensis