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Table 2 Taxonomic distributions of the C +/- ribosomal proteins

From: Horizontal gene transfer of zinc and non-zinc forms of bacterial ribosomal protein S4

 

L32

L36

L31

S14

L33

S18

L28

S4

Verrucomicrobiae

-

-

-

-

-

-

-

-

α-proteobacteria

+,-

-

-

-

-

-

-

-

Bacteroidetes

+,-

-

-

-

-

-

-

-

Chlamydiae

+

-

-

-

-

-

-

-

Fusobacteria

+

nd

-

-

-

-

-

-

β-proteobacteria

-

+,+/-

+,-,+/-

-

-

-

-

+,-

γ-proteobacteria

-

+,-,+/-

+,-,+/-

-

-

-

-

-

Chlorobi

+

+

+

-

-

-

-

-

Planctomycetes

nd

-

+

+

-

-

-

-,+/-

Deinococcus

+

+

-

+, -

-

-

-,+/-

-

Cyanobacteria

-

+,-

+,-

+,-

+,-

-

-

+,-

Bacilli

+,-

+

-,+/-

+,-,+/-

-,+/-

-

-

-

Tenericutes (Mollicutes)

+,-

+,-

+

+,-

+

+,-

-

-

ε-proteobacteria

-

+

+,-

+

+,-

+,-

-

-

Actinobacteria

+,-

+

+,-,+/-

+,-,+/-

+,-,+/-

+,-,+/-

+,-,+/-

+,-

Chloroflexi

+

+

+,-

+

+,-

+,-,+/-

+,-,+/-

+,-

Spirochaetes

+

+

+,-

+

-

+,-

+,-

+,-

Thermus

+

+

+

+

+

-

-

+

Magnetococcus

+

+

+

+

+

+

-

+

Aquificae

+

+

+

+

+

+

+

-

δ-proteobacteria

+

+

+

+

+,-

+

+

+

Clostridia

+

+

+

+

+

+

+

+,+/-

Acidobacteria

+

+

+

+

+

+

+

+

Thermotogae

+

+

+

+

+

+

+

+

  1. The complete data set is given as Additional File 1.
  2. +,- indicates each form comprises at least 10% of the group, but occurs only once in each genome.
  3. +/- indicates at least 10% of the genomes in the group contain both forms. This cut-off removes all minor cases of HGT. nd indicates that the r-protein was not detected.