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Table 1 Positive fragments identified by Geneconv

From: Identifying concerted evolution and gene conversion in mammalian gene pairs lasting over 100 million years

 

ORF1

Genomic DNA1,2

 

Primate

Rodent

Human

Mouse

BMP8A/B

(Exons 1–5h)

(Exons 2–4r)

Exon 1-Intron 1

Intron 1-Intron 3

   

Intron 3-Intron 6

Intron 4-Intron 5

DDX19A/B

Exons 8–12a

Exons 8–12a

Exon 8-Intron 8

Exon 8-Exon 12

   

Exon 10-Intron 10

 
   

Intron 10-Intron 11

 

TUBG1/2

Exons 2–3h, c, rh

Exons 6–10a

Intron 1-Intron 3

Intron 2-Exon 3

 

Exons 7–11c, o, rh

 

Intron 6-Intron 7

Exon 7-Intron 10

   

Intron 8-Intron 10

 
  1. 1 Exons were included if >50 bps were within the positive fragment.
  2. 2 Introns were included if >100 bps were within the positive fragment.
  3. h Human, c chimp, o orangutan, rh rhesus macaque, r rat, a all primates or rodents.
  4. Hits enclosed by brackets are positive pairwise fragments only. P-value for that region in the global analysis is not significant (>0.05).
  5. Hits within genomic DNA span both introns and exons.