Integration of Bayesian molecular clock methods and fossil-based soft bounds reveals early Cenozoic origin of African lacertid lizards

Hipsley, Christy A; Himmelmann, Lin; Metzler, Dirk; Müller, Johannes

doi:10.1186/1471-2148-9-151

Table 1 GenBank accession numbers for mitochondrial and nuclear gene sequences used in the phylogenetic analysis of Lacertidae.

From: Integration of Bayesian molecular clock methods and fossil-based soft bounds reveals early Cenozoic origin of African lacertid lizards

Species	c-mos	rag1	12S	16S	cytb
Acanthodactylus boskianus	EF632251	EF632206	AY633417	AY633441	AF206536^a
Adolfus jacksoni	EF632253	EF632208	AF206615	AF206615	AF206539
Algyroides fitzingeri	EF632254^b	EF632209^b	AF206598	AF111177	AF206529
Anatololacerta danfordi	DQ461743	EF632224	AJ238188	AF080324	AF080323
Apathya cappadocica	EF632268	EF632223	AF145444	AF149946	AF080329
Archaeolacerta bedriagae	EF632256	EF632211	AF206592	AF206592	AF080326
Cnemidophorus tigris	AF039481	AY662620	AF206585	AY046492	AF006270
Dalmatolacerta oxycephala	EF632271	EF632228	AF440601	AF440616	AY256651
Darevskia valentini	EF632257	EF632212	AF206597	AF206597	LVU88611
Dinarolacerta mosorensis	EF632270	EF632227	AF440600	AF440615	AY151902
Eremias arguta	EF632258	EF632213	AY035827	AY035837	AF206549^c
Gallotia galloti	EF632260	EF632215	AF206587	AF206587	AY151840
Heliobolus spekii	EF632262	EF632217	AF206608	AF206608	AF206544
Hellenolacerta graeca	EF632269	EF632225	AF440602	AF440617	AF080272
Iberolacerta monticola	EF632265	EF632220	AF440589	AF440604	AY151872
Ichnotropis squamulosa	EF632266	EF632221	AF080365	AF080367	AF080366
Lacerta agilis	EF632267	EF632222	AF149947	DQ494823	AF080299
Latastia longicaudata	EF632272	EF632229	AF206609	AF206609	AF206545
Meroles suborbitalis	EF632273	EF632230	AF206611	AF206611	AF206540
Mesalina guttulata	EF632274	EF632231	AY218019	AY217969	AY217815
Mesalina rubropunctata	EF632275	EF632232	AY035830	AY035840	EF555274
Nucras tessellata	EF632276^d	EF632233^d	AF206612	AF206612	AF206550
Omanosaura jayakari	EF632277	EF632234	AF080350	AF080352	AF080351
Ophisops elegans	EF632278	EF632235	AF206605	AF206605	AF206532
Parvilacerta fraasii	EF632279^e	EF632236^e	AJ238187	AF080318	AF080317
Pedioplanis namaquensis	EF632280^f	EF632237^f	AF206613	AF206613	AF206546
Phoenicolacerta laevis	DQ461740	EF632226	AJ238183	AF080333	AF080332
Podarcis muralis	EF632282	EF632239	AF206600	AF206600	AY151912
Poromera fordii	EF632283	EF632240	AF080368	AF080370	AF080369
Psammodromus algirus	EF632284	EF632241	AY218020	DQ298734	AY217816
Psammodromus hispanicus	EF632285	EF632242	DQ298606	DQ298676	DQ298562
Rhineura floridana	AY444021	AY662618	AY881097	AY605473	AY605473
Sphenodon punctatus	AF039483	AY662576	AF534390	DQ267621	AF534390
Takydromus sexlineatus	EF632288	EF632245	AF206589	AF206589	AY248472
Tiera dugesii	EF632289	EF632246	AF543309	AF080315	AF080314
Timon lepidus	EF632290	EF632247	AF206595	AF206595	AY151899
Tropidosaura gularis	EF632291	EF632248	AF206616	AF206616	AF206541
Zootoca vivipara	EF632292	EF632249	AF206594	AF206594	AY151913

^a Acanthodactylus erythrurus
^b Algyroides moreoticus
^c Eremias velox
^d Nucras lalandii
^e Parvilacerta parva
^f Pedioplanis undata
Species substitutions for missing gene sequences are noted by superscripts.

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ISSN: 2730-7182

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