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Table 3 Total number of network-related loci and 3R-WGD-derived duplicated loci identified in each teleost genome.

From: Temporal pattern of loss/persistence of duplicate genes involved in signal transduction and metabolic pathways after teleost-specific genome duplication

  LTP TT OT
  # of loci 3R-derived # of loci 3R-derived # of loci 3R-derived
CA 58 NA 22 NA 22 NA
Tetraodon 66 (68) 26 (26) 24 (27) 6 (6) 29 (31) 16 (18)
Stickleback 71 (74) 34 (35) 27 (34) 12 (12) 27 (33) 16 (22)
Medaka 71 (73) 30 (31) 25 (27) 10 (10) 26 (26) 12 (12)
Zebrafish 55 (61) 22 (23) 24 (25) 10 (10) 26 (29) 12 (13)
Average 65.8 (69.0) 28.0 (28.8) 25.0 (28.3) 9.5 (9.5) 27.0 (29.8) 14.0 (16.3)
  TCA Grand total1   
  # of loci 3R-derived # of loci 3R-derived   
CA 27 NA 116 NA   
Tetraodon 30 (31) 10 (10) 133 (141) 52 (54)   
Stickleback 33 (33) 16 (16) 144 (162) 72 (79)   
Medaka 31 (31) 10 (10) 136 (140) 56 (57)   
Zebrafish 26 (31) 2 (2) 117 (131) 38 (40)   
Average 30.0 (31.5) 9.5 (9.5) 132.5 (143.5) 54.5 (57.5)   
  1. The numerals in parentheses indicate the number of loci in which lineage-specific gene duplications were incorporated.
  2. 1Overlaps between genes that were involved in more than one network were controlled.
  3. Abbreviations: LPT, long-term potentiation; TT, taste transduction; OT, olfactory transduction; TCA, tricarboxylic acid cycle; CA, common ancestor of tetrapods and teleost fishes; 3R, third-round whole genome duplication; NA, not applicable