Protein-coding regions | Intronic/intergenic regionse | Silent sitesf | |||||||
---|---|---|---|---|---|---|---|---|---|
ptDNA | mtDNA | nucDNA | ptDNA | mtDNA | nucDNA | ptDNA | mtDNA | nucDNA | |
# of sites a | 7272 | 8160 | 1623 | 9438 | 2457 | 4510 | 16710 | 5550 | 5051 |
S | 45 | 44 | 26 | 276 | 58 | 355 | 321 | 104 | 377 |
# of Indels b (length nt) | 1 (21) | 1 (6) | 1 (9) | 85 (1672) | 9 (23) | 47 (216) | 86 (1679) | 11 (31) | 48 (222) |
π c × 10 -3 (SD × 10 -3 ) | 2.82 (0.34) | 2.06 (0.43) | 6.02 (0.99) | 15.17 (1.70) | 8.92 (1.88) | 33.50 (3.15) | 14.53 (1.18) | 8.51 (1.03) | 32.29 (3.01) |
π + d × 10 -3 (SD × 10 -3 ) | --- | --- | --- | 19.54 (2.03) | 10.29 (2.02) | 38.63 (3.70) | 18.36 (1.40) | 9.23 (1.96) | 36.00 (3.51) |
π syn × 10 -3 | 8.46 | 8.52 | 19.57 | --- | --- | --- | --- | --- | --- |
π nsyn × 10 -3 | 1.14 | 0 | 1.42 | --- | --- | --- | --- | --- | --- |