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Table 2 Sequence differences between pre-adapted T3 (T3+E) and the published wild-type T3+

From: Compensatory evolution for a gene deletion is not limited to its immediate functional network

Nucleotide position

Change

Gene

9606

CG insert

endonuclease (3)

9625

G insert

endonuclease (3)

9968

G insert

endonuclease (3)

9973

G deletion

endonuclease (3)

19676-7

CA->AC

head-tail connector (8)

25203P

A->G

tail B (12)

37621P

G->A

unknown (19.5)

37630P

A->G

unknown (19.5)

  1. Sequences were determined as a consensus of the phage population and compared to the published sequence of T3 [4]; the relative abundance of a base had to exceed 10% of the total before it was considered real.
  2. P – polymorphic