Skip to main content

Table 2 NLR-SUBFAMILY A in zebrafish

From: A genomic view of the NOD-like receptor family in teleost fish: identification of a novel NLR subfamily in zebrafish

Chromosome

Location (m)

Nickname

ENSEMBL prediction ID (ENSDARG000000)

REFSEQ/uniprot ID

Domains identifieda

16

61.01

NLR-A1/NOD1

36308

XP_699379

C-N-L

7

47.25

NLR-A2/NOD2

10756

Q1AMZ9

C-C-N-L

24

41.14

NLR-A3/NOD3

61564

XP_697414

X-N-L

18

20.56

NLR-A4/NOD4

24632c

 

X-N-L

15

32.04b

NLR-A5/NOD5

89201

XP_685481

X-N-L

  1. a C = CARD, N = NACHT, L = LRR, X = unknown effector domain.
  2. b Two copies of NLR-A5 situated at 32.04 and 32.17 m on chromosome 15 are 100% identical and likely represent errors in the assembly of this chromosome.
  3. c NLR-A4 is also encoded within GENSCAN prediction GENSCAN00000002276.