Figure 3
From: Assessment of codivergence of Mastreviruses with their plant hosts
Evidence of recombination in the evolution of Chinese WDV isolates. SiScan analysis, as implemented in RDP3 program (v 1.5), was performed on 29 WDV genomes from China. Shown are the results of comparison of the only two isolates (HBSJZ06-11 and YNKM06-2) that yielded significant recombination signatures when compared to a reference genome, in this case GSGG05-2. The genome organization of WDV (linearized at nucleotide position 1) is shown for orientation, including the long intergenic region (LIR), the short intergenic region (SIR), and coding regions for replication-associated proteins Rep A and Rep, movement protein (MP), and coat protein (CP).