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Table 1 Amakihi allelic diversity (A), expected (HE) and observed (HO) heterozygosity, and estimated frequencies of null alleles (N).

From: Genetic structure along an elevational gradient in Hawaiian honeycreepers reveals contrasting evolutionary responses to avian malaria

 

low-BRY (n = 98)

low-MAL (n = 84)

low-NAN (n = 72)

Locus

A

HO

HE

N

A

HO

HE

N

A

HO

HE

N

3A2C

16

0.908

0.823

-

18

0.916

0.878

-

15

0.944

0.868

-

11B1C

15

0.907

0.873

-

11

0.793

0.838

-

15

0.819

0.840

-

5A5A

15

0.827

0.897

-

16

0.831

0.865

-

15

0.889

0.891

-

4A4E

19

0.755

0.895

0.077

15

0.627

0.844

0.121

15

0.597

0.824

0.134

11B4E

10

0.763

0.737

-

12

0.643

0.658

-

10

0.789

0.730

-

12B5E

17

0.745

0.890

0.093

17

0.807

0.896

-

14

0.792

0.866

-

5A1B

17

0.707

0.897

0.111

17

0.889

0.883

-

16

0.721

0.878

0.088

Hvir65

14

0.845

0.889

-

14

0.780

0.887

0.076

12

0.833

0.867

-

Hvir66

20

0.857

0.875

-

21

0.845

0.924

0.045

18

0.806

0.884

-

Hvir94

11

0.755

0.821

-

10

0.747

0.778

-

12

0.764

0.780

-

Hvir107

9

0.680

0.818

0.084

10

0.667

0.815

0.095

8

0.653

0.790

0.069

Hvir62

5

0.592

0.623

-

6

0.646

0.616

-

5

0.500

0.564

-

Avg

14.0

0.778

0.836

 

13.9

0.766

0.824

 

12.9

0.759

0.815

 
 

mid-COO (n = 3)

mid-CRA (n = 47)

    

Locus

A

H O

H E

N

A

H O

H E

N

    

3A2C

5

1.000

0.855

n/a

14

0.609

0.807

0.116

    

11B1C

7

1.000

0.963

n/a

15

1.000

0.911

-

    

5A5A

3

0.750

0.605

n/a

12

0.622

0.857

0.137

    

4A4E

5

0.500

0.785

n/a

13

0.683

0.863

0.103

    

11B4E

2

0.500

0.428

n/a

7

0.574

0.696

0.096

    

12B5E

5

1.000

0.858

n/a

14

0.532

0.791

0.169

    

5A1B

6

1.000

0.928

n/a

13

0.739

.0858

0.068

    

Hvir65

7

0.750

0.963

n/a

12

0.778

0.801

-

    

Hvir66

4

0.750

0.785

n/a

15

0.800

0.899

-

    

Hvir94

3

1.000

0.713

n/a

8

0.681

0.740

-

    

Hvir107

4

0.750

0.820

n/a

7

0.214

0.799

0.347

    

Hvir62

2

0.250

0.250

n/a

5

0.696

0.640

-

    

Avg

4.4

0.771

0.746

 

11.3

0.661

0.805

     
 

high-CJR (n = 61)

high-SOL (n = 64)

    

Locus

A

H O

H E

N

A

H O

H E

N

    

3A2C

20

0.850

0.876

-

15

0.906

0.854

-

    

11B1C

15

0.950

0.914

-

17

0.891

0.907

-

    

5A5A

17

0.689

0.862

0.099

13

0.578

0.860

0.157

    

4A4E

16

0.820

0.892

-

18

0.710

0.890

0.101

    

11B4E

9

0.729

0.710

-

10

0.790

0.771

-

    

12B5E

16

0.721

0.843

0.068

18

0.734

0.883

0.080

    

5A1B

14

0.705

0.829

0.075

17

0.844

0.900

-

    

Hvir65

14

0.820

0.900

-

18

0.906

0.922

-

    

Hvir66

17

0.918

0.904

-

15

0.781

0.891

0.055

    

Hvir94

9

0.689

0.814

0.074

9

0.828

0.798

-

    

Hvir107

9

0.852

0.823

-

10

0.714

0.846

0.075

    

Hvir62

6

0.590

0.659

-

6

0.625

0.673

-

    

Avg

14.0

0.778

0.836

 

14.0

0.778

0.836

     
  1. Values that deviate significantly from expectations under Hardy Weinberg equilibrium are designated in bold italics.