From: The Bet v 1 fold: an ancient, versatile scaffold for binding of large, hydrophobic ligands
Family name | SCOP family | No. of structuresa | Representative structure | Â | |
---|---|---|---|---|---|
 |  |  | PDB ID | Description | RMSD/no. of aligned residuesb |
Bet v 1 family | Pathogenesis-related protein 10 (PR10)-like [SCOP:d.129.3.1] | 15 | [PDB:1bv1] | Birch pollen allergen Bet v 1; Betula verrucosa (white birch) | 0.00/159 |
START domain | STAR domain [SCOP:d.129.3.2] | 3 | [PDB:1em2] | STAR-related lipid transport domain of MLN64; Homo sapiens (human) | 2.43/108 |
Ring hydroxylases α-chain | Ring hydroxylating alpha subunit catalytic domain [SCOP:d.129.3.3] | 9 | [PDB:1o7n] | Naphthalene 1,2-dioxygenase; Pseudomonas putida | 2.42/86 |
Phosphatidylinositol transfer proteins | Phosphatidylinositol transfer protein, PITP [SCOP:d.129.3.4] | 4 | [PDB:1t27] | Phosphatidylinositol transfer protein alpha; Rattus norvegicus (rat) | 2.28/111 |
AHA1 domain | Aha1 domain [SCOP:d.129.3.5] | 8 | [PDB:1xfs] | Hypothetical protein NE0264; Nitrosomonas europaea | 2.31/115 |
Polyketide cyclases | Oligoketide cyclase/dehydrase-like [SCOP:d.129.3.6] | 2 | [PDB:1t17] | Hypothetical protein CC1736; Caulobacter crescentus | 2.59/114 |
SMU440-related | - | 1 | [PDB:2b79] | Hypothetical protein SMU440; Streptococcus mutans | 2.65/132 |
PA1206-related | - | 1 | [PDB:2ffs] | Hypothetical protein PA1206; Pseudomonas aeruginosa | 2.53/115 |
Homotrimeric ring hydroxylases | - | 2 | [PDB:1z01] | 2-Oxo-1,2-dihydroquinoline 8-monooxygenase; Pseudomonas putida | 2.47/99 |
CalC-related | - | 1 | [PDB:1zxf] | Self-sacrificing resistance protein CalC; Micromonospora echinospora | 2.93/87 |
CoxG family | - | 2 | [PDB:2ns9] | Hypothetical protein APE2225; Aeropyrum pernix | 2.53/117 |