Table 2 Domain Versatility Indices (DV I) for 30 selected Pfam A domains. DV I, the domain versatility index. Err, the calculated error of the regression coefficient. Description, description as taken from the Pfam database.
| Â | Â | Â | Domains with a low DV I |
|---|---|---|---|
Domain | DVI | ± SE | Description |
PF02861.9 | 0.231 | 0.015 | Clp_N; Clp amino terminal domain |
PF06815.2 | 0.236 | 0.014 | RVT_connect; Reverse transcriptase connection domain |
PF00353.9 | 0.244 | 0.022 | HemolysinCabind; Hemolysin-type calcium-binding repeat (2 copies) |
PF00030.8 | 0.269 | 0.021 | Crystall; Beta/Gamma crystallin |
PF03130.5 | 0.275 | 0.020 | HEAT_PBS; PBS lyase HEAT-like repeat |
PF00009.15 | 0.276 | 0.006 | GTP_EFTU; Elongation factor Tu GTP binding domain |
PF00402.7 | 0.282 | 0.020 | Calponin; Calponin family repeat |
PF00954.11 | 0.288 | 0.028 | S_locus glycop; S-locus glycoprotein family |
PF00228.9 | 0.296 | 0.018 | Bowman-Birk_leg; Bowman-Birk serine protease inhibitor family |
PF02012.9 | 0.306 | 0.030 | BNR; BNR/Asp-box repeat |
| Â | Â | Â | Domains with a medium DV I |
Domain | DVI | ± SE | Description |
PF02362.12 | 0.626 | 0.014 | B3; B3 DNA binding domain |
PF01825.10 | 0.627 | 0.035 | GPS; Latrophilin/CL-1-like GPS domain |
PF07721.4 | 0.627 | 0.025 | TPR_4; Tetratricopeptide repeat |
PF01302.13 | 0.628 | 0.031 | CAP_GLY; CAP-Gly domain |
PF00176.12 | 0.630 | 0.009 | SNF2_N; SNF2 family N-terminal domain |
PF00567.14 | 0.631 | 0.039 | TUDOR; Tudor domain |
PF01390.8 | 0.631 | 0.044 | SEA; SEA domain |
PF07686.5 | 0.632 | 0.016 | V-set; Immunoglobulin V-set domain |
PF00067.11 | 0.633 | 0.012 | p450; Cytochrome P450 |
PF00165.11 | 0.633 | 0.009 | HTH_AraC; Bacterial regulatory helix-turn-helix proteins, AraC family |
PF00249.19 | 0.635 | 0.014 | Myb_DNA-binding; Myb-like DNA-binding domain |
| Â | Â | Â | Domains with a high DV I |
Domain | DVI | ± SE | Description |
PF00004.18 | 0.826 | 0.006 | AAA; ATPase family associated with various cellular activities (AAA) |
PF00583.13 | 0.827 | 0.006 | Acetyltransf_1; Acetyltransferase (GNAT) family |
PF00250.7 | 0.828 | 0.011 | Fork_head; Fork head domain |
PF01926.11 | 0.828 | 0.011 | MMR_HSR1; GTPase of unknown function |
PF00001.11 | 0.830 | 0.011 | 7tm_1; 7 transmembrane receptor (rhodopsin family) |
PF01464.9 | 0.846 | 0.025 | SLT; Transglycosylase SLT domain |
PF04055.9 | 0.857 | 0.006 | Radical_SAM; Radical SAM superfamily |
PF00496.11 | 0.858 | 0.015 | SBP_bac_5; Bacterial extracellular solute-binding proteins, family 5 Middle |
PF02393.6 | 0.872 | 0.040 | US22; US22 like |
PF08241.1 | 0.911 | 0.007 | Methyltransf_11; Methyltransferase domain |