Skip to main content

Table 1 Accession Numbers and Proposed Classification of Proteins Used in This Study

From: Evolution of a family of metazoan active-site-serine enzymes from penicillin-binding proteins: a novel facet of the bacterial legacy

Species

Accession number

Database

Proposed classification

Reference

EUKARYOTA

    

Vertebrata

    

Bos taurus

P83095

Swiss-Prot

LACTB

[12]

Bos taurus

XP_601949

RefSeq

LACTB-like protein 2

 

Canis familiaris

XP_544713

RefSeq

LACTB

[47]

Danio rerio

NP_001018429

RefSeq

LACTB

 

Fugu rubipes

SINFRUP00000138119

Ensembl

LACTB

 

Gallus gallus

Q5ZK12

Swiss-Prot

LACTB

[48]

Gallus gallus

XP_001232283

RefSeq

LACTB-like protein 2

[48]

Gasterosteus aculeatus

ENSGACP00000014046

Ensembl

LACTB

 

Homo sapiens

P83111

Swiss-Prot

LACTB

[9]

Homo sapiens

XP_934300

RefSeq

LACTB-like protein 2

 

Macaca mulatta

ENSMMUP00000004719

Ensembl

LACTB

 

Monodephis domestica

ENSMODP00000013893

Ensembl

LACTB

 

Mus musculus

Q9EP89

Swiss-Prot

LACTB

[11,13]

Mus musculus

XP_205950

RefSeq

LACTB-like protein 2

 

Oryctolagus cuniculus

ENSOCUP00000008608

Ensembl

LACTB

 

Oryzias latipes

ENSORLP00000009787

Ensembl

LACTB

 

Tetrodon nigroviridis

CAG03509

GenPept

LACTB-like protein 2

[49]

Tetrodon nigroviridis

GSTENP00015949001

Ensembl

LACTB

[49]

Xenopus tropicalis

ENSXETG00000009720

Ensembl

LACTB

 

Tunicata

    

Ciona intestinalis

ENSCING00000006798

Ensembl

LACTB

[50]

Echinodermata

    

Strongylocent. purpuratus

XP_781179

RefSeq

Esterase-like

 

Strongylocent. purpuratus

XP_781241

RefSeq

Esterase-like

 

Strongylocent. purpuratus

XP_789736

RefSeq

LACTB

 

Nematoda

    

Caenorhabditis briggsae

CAE57335

GenPept

LACTB-like protein 1

[51]

Caenorhabditis briggsae

CAE57450

GenPept

Esterase-like

[51]

Caenorhabditis briggsae

CAE59629

GenPept

Esterase-like

[51]

Caenorhabditis briggsae

CAE67822

GenPept

Esterase-like

[51]

Caenorhabditis briggsae

CAE73201

GenPept

Esterase-like

[51]

Caenorhabditis briggsae

CAE74593

GenPept

LACTB

[51]

Caenorhabditis briggsae

CAE75151

GenPept

LACTB-like protein 1

[51]

Caenorhabditis elegans

NP_001041033

RefSeq

LACTB

[52]

Caenorhabditis elegans

NP_495790

RefSeq

Esterase-like

[52]

Caenorhabditis elegans

NP_496176

RefSeq

Esterase-like

[52]

Caenorhabditis elegans

NP_496299

RefSeq

Esterase-like

[52]

Caenorhabditis elegans

NP_505821

RefSeq

LACTB-like protein 1

[52]

Caenorhabditis elegans

NP_509221

RefSeq

Esterase-like

[52]

Caenorhabditis elegans

NP_509969

RefSeq

LACTB-like protein 1

[52]

Platyhelminthes

    

Schistosoma japonicum

AAX27853, AAX25200

GenPept

LACTB

 

Mycetozoa

    

Dictyostelium discoideum

Q55CN2

Swiss-Prot

LACTB

[53]

Dictyostelium discoideum

XP_640123

RefSeq

LACTB-like protein 2

[53]

Dictyostelium discoideum

XP_640124

RefSeq

LACTB-like protein 2

[53]

Dictyostelium discoideum

XP_641364

RefSeq

LACTB-like protein 2

[53]

BACTERIA

    

α-proteobacteria

    

Bradyrhizobium japonicum

NP_770552

RefSeq

LPBP-Ba

 

Hyphomonas neptunium

YP_759849

RefSeq

LPBP-Ba

 

Maricaulis maris

YP_755834

RefSeq

LPBP-Ba

 

Mesorhizobium loti

NP_107127

RefSeq

LPBP-Ba

 

Oceanicaulis alexandrii

YP_755834

RefSeq

LPBP-Ba

 

Sphingopyxis alaskensis

YP_618034

RefSeq

LPBP-Ba

 

β-proteobacteria

    

Burkholderia gladioli

Q9KX40

Swiss-Prot

LPBP-Ba

 

Bacillae

    

Bacillus cereus

ZP_00239307

RefSeq

LPBP-Ba

 

Actinobacteria

    

Streptomyces sp. strain R61

P15555

Swiss-Prot

 

[22,23]

Salinispora tropica

ZP_01429613

RefSeq

LPBP-Ba

 
  1. NOTE.- aClassified according to the scheme of Massova and Mobashery [3].